Oryzias melastigma (Indian medaka): 112142194
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Entry
112142194 CDS
T07439
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112142194 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112142194 (mlh3)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112142194 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
112142194
NCBI-ProteinID:
XP_024121244
Ensembl:
ENSOMEG00000021076
LinkDB
All DBs
Position
LG22:14173365..14179562
Genome browser
AA seq
1150 aa
AA seq
DB search
MIKLLPPEVQGHLRSGVAIPSLQQCVEELVLNSIDAGATCVGVRMDLEAFKVQVIDNGAG
MNAEDMERVGTRYHTSKCGSLEDLDNIKSHGFRGEALASIVSMATLVEISSRPRASAKTH
VKLFKDGRGVDVFEAETDRPSAGTTVIICNFFHNMPVRRRRLDPVLEGERIRHRVEAVSL
MHPSVSFTLKNDSTGAMMVQLPKAKSTYHRFLQIHGLTRAEKLGEISHTYKQFEAVGYLG
KEGHYNNSLQFLYVNERLLLKTRIHKLLNLLLRRLRQKPDTSDGPPVLKSPKNKQTHELF
GVYILNIKCSYSEYDICFEPAKTLIEFKDWEEVLLCVEEAVKAFLRRENLTSEFSQEDLD
FVSPKVFGPSRADQEVDQTRAAPPDISTMDCSVGMKLASEFVHRRRTDGGACPEPGLTKN
KTEETEESGQTGASVDESQTTTQVESEGSGGVKNAKMPNEHEWELSEDVRQSGSSTCSFS
QLVSNDLNCSKCIINIHNTGRPQQSLESNRKISLSEPVIHNILQIPKQSQTNKVTFPEQR
LEKNSQDKYIAPKRKISLNTAPDRSTENPHRDLSSNPPTKISRIFPCQKPSVFKESGSLD
RFRRMYAQSGEMKLPRQHQQKGPQTSSRVIISSSLSFCNNDLKEPKTTEAQGDEEKQSSS
LNPPCFSTVKTTNKNKLSFSAKLSQLKEKRKEDAEVSLHASSSMLEKNICNKGTEEDSTS
QNPPNTAVYAGSSPRHRTSPHQTGNEEDSASSVWLHHYNTYVGQTVYVNRMTGLSRYDNP
AEETQVPCTSDVTNMAVSVFSETAVGMEYRCYPFQLAVVLPFLPKSRSERLISSGLDCGD
AATESSNSLSVMYSKWKNPVFVQPPEVGVDISGGQADGLVVKIHSVLFPYRLSKAMIHSM
KVIDQVDKKFLACLINTSEEELTLEGETEGNLLVLVDQHAAHERVRLENLITDSYEDIPE
TFGEKWLCSSSIVPPLEISVTEEELRLLSSCRSQLRSLGLEVTFSETQMSSVFVGKVPRC
FLEKETNELKRGRPSIIKTIVEEFLQEQIELLLSTGRVKGTLPITVLKVLASLACHGAVK
FNDVLNRDECHSLVASLSSCQLPFQCAHGRPSIAPLVDINHLDEDPKDVQKPNLKKLRRM
YEEWKLRGNI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattgttgcctcctgaagttcaggggcaccttcgctccggcgtggccatccct
tccctgcagcagtgcgtggaggagctcgttttgaacagcatcgatgccggggcgacctgc
gtgggtgtccgaatggacctggaggcttttaaagtccaggtgatcgacaacggtgccggg
atgaacgccgaggacatggagcgtgtgggaacccggtaccacacaagcaaatgtggctct
ttggaagacctggacaacatcaaatctcatggttttagaggagaggcattggcaagtatt
gtttccatggcaacgcttgttgaaatctcatcccgtcccagggcgtctgctaaaacccac
gtgaagctgttcaaagacgggaggggcgtggatgtctttgaagcggagactgacagaccc
tctgcaggaacgaccgtcatcatctgtaacttcttccacaacatgccggtgcggaggagg
aggctggatcctgtgctggagggggaacggatcagacacagggtggaggccgtttccctc
atgcacccatctgtgtccttcaccctgaaaaatgacagcactggagccatgatggtgcag
ctcccaaaagctaaaagcacttaccacaggtttttgcagatccacggcctcacgcgagca
gagaagcttggagaaatctctcacacctacaagcaatttgaagcagtggggtaccttggc
aaagaggggcactacaataacagcttgcagttcctgtatgtaaacgaaaggctgctgttg
aaaacaaggatccacaaactgttgaacctcctcctgcgcagactgagacagaaaccggac
acttcagatggacctcctgtcctcaaaagtccaaagaataagcaaacccatgagcttttt
ggtgtctacatcctcaacattaaatgttcttactccgagtatgatatttgctttgaaccg
gccaaaactctaatagagtttaaagactgggaagaggttttactttgtgttgaagaagca
gtaaaagcctttctgaggagggagaacttgacgtccgagttttctcaggaggacttggac
ttcgtgtctccaaaagtgtttggcccttctagagcagatcaagaggtggaccaaactaga
gcagcgcccccagacatttccaccatggactgcagcgttggaatgaaacttgcatctgaa
tttgttcaccgtaggaggacagatggtggggcttgcccagagcctggtctgactaaaaac
aaaaccgaagagactgaagaatcaggacaaacgggcgcatctgtagatgagtcacaaaca
acaacccaagttgagtcagaaggcagtggaggggttaaaaatgcaaagatgccaaatgag
catgagtgggaactttcagaagatgtgagacaaagcggtagctccacctgcagcttctct
cagctggtttcaaatgacttaaactgctctaaatgtataatcaacatacataacacaggc
agaccacaacagtccttagaaagcaacagaaaaatcagcctgtctgaaccagttattcac
aatattctgcaaattcctaaacagtcccaaactaacaaggtcacatttccagagcagagg
ttagaaaaaaatagccaggataaatacatagcaccaaaacgcaaaatctctctgaatact
gctccggacagatccactgaaaatccacacagagacctttcttctaacccccccacaaag
atttccagaatatttccttgtcagaaaccgtctgtatttaaggaatctggatcccttgat
aggtttagacgaatgtatgctcaatctggtgagatgaaactacctcgtcagcatcaacag
aaaggacctcaaacgtccagccgtgttataatttcctcaagtttgtccttttgtaacaat
gatctgaaggagcctaaaaccactgaggcacaaggggatgaggagaagcagagttcctcc
ctaaatccaccatgcttctccactgtgaaaactacgaataaaaataaattatctttctct
gcaaaactttcccagttaaaggaaaaaaggaaagaagatgcagaagtttctctgcatgcg
tccagcagtatgttggagaaaaatatatgcaataaaggcacagaggaggatagcactagt
cagaatcctccaaacactgcagtgtatgctgggtcaagcccacgccacaggacaagtcct
catcagactgggaatgaggaagactcagcatccagcgtttggcttcatcactacaacaca
tacgtcggacagactgtatatgtcaacagaatgaccggactcagcagatacgacaaccca
gccgaggaaacacaagtgccctgcacgtccgatgtcaccaatatggcagttagtgtcttc
tctgaaacggctgtagggatggagtacaggtgttacccatttcagttggctgtagtgttg
cctttcctgcctaaatccaggtcagagaggctgattagctcagggcttgattgcggagat
gctgccaccgaaagctccaactccctctctgtgatgtactctaaatggaagaatcctgta
tttgtccaaccccccgaggtcggtgtggacatttctggagggcaagcggacgggttggtt
gtgaaaatccacagtgttttgtttccttaccgtttatccaaagccatgattcactcaatg
aaggtcattgatcaagtggataagaagtttcttgcgtgtcttatcaacacaagtgaggaa
gagctcacattagagggtgaaactgaaggaaatctgctggtgctggtggatcagcatgct
gcgcacgagagagttcgacttgaaaacctcatcacagattcatacgaggacatcccagaa
acatttggagagaagtggctgtgctcatcgagcattgttccacctctggagatcagtgta
acagaagaggagctcaggctgctcagctcgtgcaggtcacagttaaggagtttgggcctt
gaagttactttttcagagacacaaatgtcctctgtgtttgtggggaaggtgccacggtgc
tttttggaaaaggagactaatgagctgaaaagaggtagaccatccattatcaagaccatt
gttgaggagtttcttcaagagcagattgaattactactctccactggcagggtgaaaggg
actctgcccatcactgtgctgaaagtcctcgcctcgctcgcgtgccatggtgctgtcaag
ttcaatgatgttctaaacagggacgaatgccacagcttagtggcgtctttgtcttcttgc
cagctgcccttccaatgcgcccacggccgtccctccatcgcacctctggtagacatcaat
catttggatgaagacccaaaggatgtccagaaaccaaatctgaaaaagctgagaagaatg
tatgaagagtggaagctccgtgggaatatctaa
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