Oryzias melastigma (Indian medaka): 112142310
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Entry
112142310 CDS
T07439
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04520
Adherens junction
oml04916
Melanogenesis
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112142310 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112142310 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112142310 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112142310 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112142310 (tcf7)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
112142310 (tcf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112142310
NCBI-ProteinID:
XP_024121361
Ensembl:
ENSOMEG00000003637
UniProt:
A0A3B3BBW1
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Position
LG14:23156688..23225949
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AA seq
525 aa
AA seq
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MPQLSSGGGDDLGANDEMISFKDEGEQEEKIQENAFTERDLADLKSSLVNESEIHQSPSA
AAVRRGQQGEQRGFPDKHREHLEVVSKQQDGSMYKSAAYPGYPFLMLPDPYLPNSSVSPS
SNKVSVVQQSHGMHPLTSLLPYSNDHFSPSPPHLPTDMSQKTGVPRHQSQDLPGYYSLPP
GGVGQISPSMSWQSQTVYPGLSPCGFRQPYSSNLPSASSYSRFPHSLMLGPSGMHPTGIP
HPAIVPHSGKQEHDQYDRGMYVKQQVETKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAE
CTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPTWSARDNYEAGLSGVA
GEKNKADWGKKKRRKREKQQDSNTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQG
GGCPSPSSSDISAIDSPPSPCPGRLRLYQHPPSPGYSPPPSSPSTRLPLPSHTRSHSADK
RGAPHPPAAKLAHTLLELSKQTHCSRALSAAKVAGLSLKVLTETQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagcagtggcggaggggatgacctgggcgcaaatgatgagatgatatcg
ttcaaagacgagggagaacaagaggagaaaatccaagaaaacgccttcacggagagagac
ctggccgacctgaagtcctccctggtcaacgagtcggagatccatcagagtccgagcgcg
gcggcggtcagacgggggcagcagggcgagcagaggggcttcccagacaaacaccgagag
catctcgaagtggtgtcgaagcaacaagatggaagcatgtacaagtcggcggcgtacccg
gggtatccgttcctgatgctgccggacccctacctccccaacagctcggtgtctccatct
tctaacaaagtctcggtggttcagcagtcccacgggatgcacccgctgacgtccctgctg
ccctacagcaatgatcacttcagcccaagtcccccacacctgcccacagacatgagtcag
aaaacaggcgttcccaggcaccagtcccaggacctcccgggctattactcccttcctcca
ggtggcgtcggccagattagcccctccatgagctggcagagccagaccgtctatcctggc
ctgtccccctgtggattcaggcagccctactcctccaacctccccagcgcctcatcctac
tccaggtttcctcactctctgatgctcggaccatccggcatgcaccctacagggatcccc
cacccagccatagtgccccattcaggcaaacaggagcacgatcagtacgacaggggcatg
tatgtgaagcagcaggtggagaccaaacgggagaaggagcccaaaaaacccgtcatcaag
aaacccctgaacgccttcatgctgtacatgaaggagatgagggcgaaggtgatcgcagag
tgcacattaaaggagagcgccgccatcaatcagattttaggacggaggtggcacgcgctg
actcgggaagagcaggccaagtactacgagctggccagaaaagaaagacaactgcacatg
cagctctacccgacctggtccgctagagacaactacgaggcgggccttagcggggtcgca
ggggaaaagaataaagctgattggggcaagaagaagagaagaaaaagggagaagcagcag
gactccaacacagacccgggttctcctaagaaatgccgggctcgcttcggcctcaaccaa
caaacggactggtgcggtccctgcaggaggaaaaagaagtgcattcgctaccttcaagga
ggaggctgccccagcccatcttcttcagatataagtgctatagactctcccccctcccct
tgccccggccgccttcgcctctaccagcaccccccgtctccgggctactccccgccgccc
tcctccccgtccacgcgcctccccttgccgtcgcacacccgctcgcactccgccgacaaa
cgcggcgccccccatccgcccgccgccaagctcgcccacacgctcctggaactgtccaag
cagacgcattgctcaagggcgctgtcggccgccaaggtggcaggactctccctcaaagtg
ttgacagagactcagtga
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