Oryzias melastigma (Indian medaka): 112142311
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Entry
112142311 CDS
T07439
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112142311 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112142311 (dkc1)
03032 DNA replication proteins [BR:
oml03032
]
112142311 (dkc1)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
112142311 (dkc1)
Prokaryotic type
112142311 (dkc1)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
112142311 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
Motif
Other DBs
NCBI-GeneID:
112142311
NCBI-ProteinID:
XP_024121357
Ensembl:
ENSOMEG00000005786
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MAEVEVTSVKKKKGKKVCDDDVGEIQRSADFFIQPDSKATSLNTSQWPLLLKNFDKLNVR
TGHYTPLPNGSNPLKRNIADYVRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLD
PKVTGCLIVCIDRATRLVKSQQSAGKEYVGIVRLHNAVENQHALARALETLTGALFQRPP
LIAAVKRQLRVRTIYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQE
LRRVRSGVLGEKDNMVTMHDVLDAQWQFDHNKDESYLRRVIFPLEKLLVSHRRLVMKDSS
VNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGFVAK
IKRVIMERDTYPRKWGLGPKATQKKAMIQKGLLDKHGKPNGSTPQDWREQYVDYSVATAA
EEPPDASLKRKRVGSGSDGETAQTSVSPEETKKEKKKKKKEKRLKMEEAEPQETDAVQEQ
VVESAKKKKKKKKHEDSGSE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggttgaagtaacgtctgtaaagaagaagaaggggaagaaagtctgtgatgac
gacgtcggggagatccagaggagcgcagacttcttcatccagccggactccaaggcaacg
tctctgaacacgtcacagtggcccctcctccttaagaacttcgataagctgaatgtgcgg
acaggccactacacccccctgcccaacggcagcaaccccctgaagaggaacatcgcagac
tacgtcaggtccggcttcatcaatctggacaagccagccaacccgtcgtcccacgaggtt
gtggcgtggattcgtaggattctgcgggtggagaaaaccggacacagcgggacgctggat
cctaaagtcactggctgcctgatcgtgtgcatagaccgggccacgcgattggtcaaatcg
cagcagagcgcaggtaaagagtatgtagggatcgtccggttgcacaacgccgttgagaat
cagcacgctctggcccgggcactggagacgctgacgggagccttattccagcgaccgccg
ctgattgccgctgtgaaacgccagctcagagtccggaccatctatgagagcaaactgatc
gagtacgacccggaacggcggctgggaatcttctgggtgagctgtgaagcggggacctac
atccggacgctgtgcgtgcacctggggctgctgctgggcgtgggcggtcagatgcaggag
ctgaggagagtgcggtctggcgttctgggggagaaggacaacatggtaaccatgcacgac
gttctagacgcgcagtggcagtttgaccacaacaaggacgagtcttacctgcggagggtc
atcttcccgctggagaagctgctggtgtcgcaccggcggctggtgatgaaggacagctcg
gtcaacgccatctgttacggggcgaagatcatgctgccaggcgtgctccggtacgaagac
ggcatagaggtgaaccaggacatcgttgtcataacgaccaaaggagaagccatctgcaca
gccgtcgccctgatgaccacagccgtcatctccacctgtgaccacggctttgtggcgaag
atcaaacgggtgatcatggagcgggacacgtatcctcgtaagtggggtctgggcccaaag
gctacgcagaagaaggccatgatccagaaggggctcctggacaaacacgggaagccgaac
ggcagcacgccgcaggactggagagagcagtatgtggactacagcgttgcaacagcagca
gaagaacctcctgatgcgtcactgaagagaaagcgggtcgggtccggcagtgacggtgag
acggcgcagacgagcgtttctccggaggagaccaagaaagagaagaagaagaagaaaaag
gagaagcggttaaaaatggaggaagcggagccacaggagaccgatgccgtgcaggagcag
gtcgtagaaagtgcaaagaagaaaaagaaaaagaagaaacacgaagactctggctcggag
tga
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