Oryzias melastigma (Indian medaka): 112142429
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Entry
112142429 CDS
T07439
Symbol
ssh2b
Name
(RefSeq) protein phosphatase Slingshot homolog 2b isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112142429 (ssh2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112142429 (ssh2b)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112142429 (ssh2b)
3.1.3.48 protein-tyrosine-phosphatase
112142429 (ssh2b)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
112142429 (ssh2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
112142429
NCBI-ProteinID:
XP_024121563
Ensembl:
ENSOMEG00000010477
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All DBs
Position
LG14:complement(17978515..17998745)
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AA seq
1188 aa
AA seq
DB search
MPPGVVTAPRSSPAACMCDCCVGKGRPYFSENSVLSQGDIYQLISESFLTVKGAALFLPR
GNGSPLSTSSRFSQLRSKHAGDIQQHLQTMFTLLRPEDNIKLAVRLESTGPQVTRYMVVV
STNGRQDTEESVVLGMDFSPVDGSCSVGLVLPLWSDTLIHLDGDGGFSVSTDNRIHVFKP
VSVQAMWSALQSLHKACEVARCHNYFPGSLFLTWVSYYQSRVSSDQTRINEWNAMQDVQS
HRADSPVLFSDIPTERELTERQIKTSLREIMTQKDLENVTCKEIRTELEMRMTCNLREFK
EFIDNEMIVILGQMDSPTEIFDHVFLGSEWNASNLDELQKSGVQYILNVTREIDNFFPGV
FEYHNIRVYDEEATDLLAYWNDTFKFISRAKKSGARCLVHCKMGISRSAATVIAYAMKEY
GWDLKKAFAYVKERRTVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSEHHEP
LSTCYAQPHSLGRSDPHNQASITPGQSMKELLESMGTPPGKAAASSSSQPDAGVSSNQLG
SSSFEGLATLSGDAEAQSLKASSRAAKSSQDSAAGSVTLSPLLCNTSCTSQERPSAPRPS
EPMAATVVPETQKTNIVTFAQSVLVDQPHPPLPGHHPLPSPAPSPAPANTDEPIKPQGPP
CSPAVTKPPVASTPASTTPSADQASPPGSIRKDDGDRPASGLSSDGAAANPSSANDFVSA
IPQDNVLLFGHSADHINFFSAREKFKGMSQDSKAAAQNSNLLKSCGKENQSVPSSEEKEE
ERKDTPAPVQVTGAKSSETLCQPVAQSSRDQNVTKPETEEREDEVISQQEPADVKEEVKN
KEEDDGTSPRLYSNWTRGSVRRATQQLEQRMKKEHETPSPSSSPPSLSGCSSHSQRRPHS
VHTSTVSPPPSASVCRQASAAGALKEGDSGKSRTAGMEVQKGHRFQPADTRLLSTSSHLH
YSAKSPFASINFLCLEGVTELESGTDWDCFMEGAHSDVVMRETWETLCELGAFLQQVSMD
GTRKACHAGPSAKRGSTFQKKLVEARIRQAGLTPPSLMKRSASLAKLGCLELLANDLNEW
ELSCSLVATPSEQTPVHPAGDESKKQRVHNSTRSEGEQPETHYIPAKTLHEASDPPPQNQ
QLRRLLSAGQDSWLPPGPTLLTTRQQYGRTHPLRRLKKRTVSTPYHTM
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgggtgttgtgactgctccgcgcagctcgccggctgcctgcatgtgtgactgc
tgcgttgggaaagggagaccctacttcagtgagaactccgtactctcgcagggagacatt
tatcaactcatcagcgaaagcttcctgacagtaaaaggggcggccctcttcttacctcga
ggaaatggctcccccctctccacttcgtctcgtttctcccagctgcggagtaaacatgca
ggagacatccagcagcacctccagacaatgttcacactcctcaggccggaggacaacatc
aagttggctgtccggttggaaagcactggtcctcaggtgacccgttacatggtggtcgtc
tcaaccaacggtcgccaggatacagaggagagcgtggtgctggggatggacttcagtcct
gtagacgggtcctgttctgtgggcctggttttacctttatggagtgacactttaatacat
ctggatggagatggaggtttcagcgtatcaactgataacagaattcatgttttcaaacct
gtttccgtgcaggccatgtggtcggccctgcagtcactccataaagcatgtgaagtcgct
cgctgccacaactactttccaggcagcttgtttctcacatgggtcagctactatcaaagc
agagtgtcctctgaccagacccgcatcaacgagtggaacgccatgcaggacgttcagtcc
caccgcgctgactcacctgtgctcttctctgacatacccacagagagagaactaactgag
aggcagatcaaaaccagcttgagggaaatcatgacgcagaaagatctggagaacgttacc
tgtaaagaaatccgaacagagctggaaatgcgcatgacatgtaacctgcgggagttcaag
gaattcatagacaacgagatgattgtgattctgggccagatggacagtcccacagagatc
tttgatcatgtcttcttgggatctgagtggaatgcatccaatctagacgagctgcagaag
agcggagtccagtacatcctgaatgtaacgagggagattgataactttttccccggcgtg
ttcgagtaccacaacatccgtgtttacgacgaggaagctactgacctgctcgcctattgg
aacgacacctttaagttcatatcaagagcaaagaagtctggggccaggtgcctggtgcac
tgtaaaatgggaatcagccgctctgccgccacagtgatcgcttacgccatgaaggagtac
ggctgggatttgaaaaaagcctttgcgtacgtcaaagagcgccgcactgtgaccaagcca
aacccttcgttcatgcgacagctggaggagtatcagggaatactcctggccagcaagcag
cggcacaacaagctgtggcgttctcactctgatagcgatctgtctgagcaccacgagcct
ctgtccacatgctatgcccagccccacagtctgggtcgctcagacccgcacaaccaggcc
agcatcacccctggtcaatctatgaaagaactgctggagtccatgggaactccacccggc
aaagcagcagcctcctcctcctcccagcccgacgctggcgtctcgtctaatcagcttggc
tcctcttcctttgaagggctggcgactctatcgggtgacgctgaagctcaaagcctcaag
gcttcttctcgtgccgccaagagcagccaggattccgcggctggttctgtgaccttatct
cctctgctctgcaacacttcatgtacctcgcaggagcggccttcagcacctcgtccctct
gagcccatggccgccaccgtggtgcccgaaactcaaaagacgaacatagtgacttttgca
caaagcgttttggtcgaccagccccacccacctttacctggtcaccacccgctcccttct
cccgctccgtcaccagctcctgcaaacacagacgagcccatcaaaccgcagggacccccc
tgctctccagctgtgacaaaaccccctgtggcgtcgacccctgcttccacaacgccaagc
gcagaccaagcttcgccaccggggtccatcagaaaagatgacggcgatagaccagcatct
ggcctgtcgtcagacggtgcagcagcgaatccgtcctcggctaatgatttcgtcagtgcc
atcccacaagacaacgtgttgctgtttggccatagcgcggatcacatcaacttcttcagc
gccagagagaagttcaagggaatgagtcaagacagcaaagctgcagcgcagaactccaac
ctgctgaaaagctgtggcaaagaaaaccagtcagtcccctcaagtgaggagaaggaagag
gaacgaaaggacacgcccgctcctgtgcaggtcacaggagccaagtcctcagagaccctt
tgccaacctgtagctcagagctcccgagaccaaaacgtgacaaaaccagagacggaggag
cgcgaggatgaggtgatctctcagcaggagcctgcagacgtcaaagaggaagtgaagaat
aaagaggaggatgatgggacttctcctcgtctctatagcaactggactcggggctccgtc
cggcgtgccactcaacagttagagcaaagaatgaagaaggagcatgaaactccgtcgcct
tcctcgtccccgccatctctctctggctgcagctcccactctcagcgccgtccgcacagc
gtccacacgtcaacagtgtctccgcctccgagcgcgtcggtttgcaggcaggcgtcagcg
gctggcgctctgaaggagggagatagtgggaagtctagaactgctggaatggaggttcag
aagggacacagattccagcctgctgataccagactgctgtctacctcgtctcatttacac
tactctgccaagtccccgtttgcctccatcaacttcctgtgcttggagggcgtgacagaa
ttggagtcgggcacagactgggactgcttcatggagggagctcacagcgacgtggtcatg
agggagacgtgggagaccctgtgcgagctgggcgccttcctgcagcaggtgagcatggac
ggaacccgcaaggcctgccacgccggtccgtctgcgaagcgaggaagcaccttccaaaag
aagctggtggaagccaggattcgccaggcgggactgaccccgccctctctgatgaagcgc
tccgcctcactggccaaactgggctgcctggaactgctcgccaacgatctgaacgaatgg
gagctcagctgctccctcgtggcgactccctccgaacaaaccccggtccacccggccggg
gacgagtccaagaagcagcgcgtgcacaactcgacccgctcagaaggcgagcagccagaa
acccactatatcccagcgaagacgcttcacgaagcgagcgaccccccgccacagaatcaa
cagctccggagactcctaagcgccggtcaggactcctggctcccccctgggcccacgttg
ctgacaacaaggcagcaatatggaagaactcaccccttgaggcgactcaaaaaaagaacc
gtcagcacgccgtaccacaccatgtga
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