KEGG   Oryzias melastigma (Indian medaka): 112142457
Entry
112142457         CDS       T07439                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112142457 (zc3h12b)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     112142457 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 112142457
NCBI-ProteinID: XP_024121631
Ensembl: ENSOMEG00000005768
LinkDB
Position
LG14:11257534..11269022
AA seq 843 aa
MTAWSMVEKLKMEKRPCREENIDSSEAQHATEESEDGSSSESESEDQKPQRAPANSSKRR
EPLAVTKPHRQLCRSPCLDRPSFSQSSTVQDLREDDTSTASGVKPVSEREYQTKIEFALK
LGYSGEQVETVLSKLGAAALINDVLAELVRLGNKVEPETQPCSSAAAPASRPPCVKETVS
PEVSVEEDSVDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFRDKGHKDITVFV
PAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGI
IVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVP
EHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCGT
GSATVKGDSSSEAKRVAPKRQSDPSIRSVACEPPEALSIVRKSETNSVPSLVSALSVPTM
QPAKSHAAGALNTRSASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASMTYSEPFPK
YDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRNPSHCPESCLSHSNSDSFS
SYGDMYPSSMDSSLEESMKGSQQAPAQGRMQAFSHGFRHEALTRVQSYGPEEPKQCSRKQ
SGAHLAPHIQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSVSDSRLYDSNP
MRQRRPPLCREQHASWDPLPCGNESFGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWSSP
WETPSAAEHQEHQVVPDHQYQTYRNLCNIFPAYIVHAVMEKNPHLTDPQQLAAVIVTKLR
SNH
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggaagag
aacattgactcaagtgaggcccagcatgccactgaggagtcggaggatggaagcagctca
gaaagtgaatccgaagaccagaaaccgcagagggctccggcgaacagcagtaaaagaaga
gaaccgctggctgtcaccaaacctcaccgtcagctctgccgctctccgtgcctcgaccgg
ccgagtttctcccagagtagcactgtccaagacctccgtgaggacgataccagcacggcg
tcaggggttaaacctgtgagtgaaagagagtaccagaccaagattgagtttgcgttgaag
ctgggctattctggagagcaagtggagacggtgctcagtaagctaggagccgcggcactc
attaacgatgttctcgctgaattggtgcgactcggaaacaaagtagagccggaaactcag
ccttgcagcagcgcagccgctccagcgtcacggcccccatgtgtgaaagagactgttagt
ccagaagtttcagtggaagaagattctgtggatacctttgataacctcaggcccatcgtc
attgacggctcaaacgttgcaatgagccatggaaacaaagaggtattctcttgtcgtggt
atccagcttgctgttgaatggtttcgggataaaggacacaaagacatcactgtatttgtt
ccagcctggaggaaggagcagtcaagacctgatgctctaatcacagatcaagaaatctta
cgcaaactggagaaggagaagatcctggttttcaccccatctcgaagagttcagggcagg
agggtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgatggaatt
attgtgtcaaacgacaactacagggacctgcaaaacgagaaaccagagtggaaaaagttt
atcgaagagcgtctcttgatgtattcatttgtcaatgacaagtttatgccacctgatgat
ccgctgggaagacatggtccaagcttggaaaattttctccgtaagcgaccggttgttcca
gagcacaaaaaacaaccttgtccctatggaaaaaagtgcacatatggacataagtgtaaa
tactatcatccagaacgtgttaaccaacctttgcggtccgtggcggatgaactccgagcc
tttgccaaattatctgcggtgaaaacgatgagtgaaggagctttagcgaaatgcggcacc
ggttcagcaactgtaaagggggacagcagctctgaagccaaacgcgtggcccccaagcgc
cagtccgatcccagcattcgctcagtggcctgtgaacctccagaggcactctccatcgta
aggaagtccgagacaaattcagtgccttccctcgtgtctgccctcagcgtgcccaccatg
cagcctgccaagagccacgcagccggggccttgaacacacgatcagccagcagccccgtt
cctggttctctgcagttttcccacagttcactggagcacatgtccagcgtgcagtatccc
ccaattttagtcacaaatagtcacggcgcctccatgacttacagtgaaccgttcccaaag
tacgactccgtcagcgatcacggatactactcactccacagtgatttctcaaacatgagc
atgagcagcatgcacaacgtggacagtttctgtagcatggagcacgagcatgtgtaccag
agaaaccccagccactgccccgagtcctgcctaagccattccaacagcgactccttctcc
tcttacggggacatgtaccccagctccatggacagcagtctggaggagagcatgaagggg
tcacagcaggctcctgcacagggaaggatgcaagccttctcccacgggtttcgccacgaa
gcactgactagagttcagagttacggaccggaggagcccaagcagtgctcccggaagcag
tctggagctcacctagcgccacacatccaacacgctgcagtgggagcccggtccagctgt
cccggagactacccacttactcagaacgtcctcccccctttgtcctctcagcccacgcgc
tctctaggtatgactcgaatggacagtgtttctgactcaaggctatatgacagtaaccca
atgaggcagaggcgacctccgctgtgccgcgagcagcacgcaagctgggaccctctgcct
tgcggtaacgagtcctttggatatcactcatatccacttagtaacagcctgatgccgtgc
tgcgagcgtgtgatggttcgcagcatgccagacaagatggaacaaatttggagctcgcca
tgggagaccccatctgcagccgagcaccaggagcatcaggtcgtcccggaccaccagtac
cagacatacaggaacctgtgcaacatctttcctgcttacatcgttcacgccgtcatggag
aaaaacccgcatttgaccgatcctcaacagctggctgcagtcatcgtcactaaactgagg
tccaaccactga

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