Oryzias melastigma (Indian medaka): 112142458 Help Entry 112142458         CDS       T07439                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oml04515]     112142458 (dchs1b) Cell adhesion molecules [BR:oml04515]  Cadherins   Cadherin related    112142458 (dchs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 Cadherin_pro Cadherin_4 TMEM154 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  112142458 NCBI-ProteinID:  XP_024121633 Ensembl:  ENSOMEG00000014091 LinkDB All DBs Position LG14:16357420..16449525 Genome browser AA seq 3301 aa AA seqDB search MTITSKGSRQRAWVRGPRMGSSLCQQKLFLYVFVILLQSTLVLGVLELQLDEGQPAGTIV GDISAGLPPGETASLYFISDHESTGVNSDLNIDETTGIITTRRRLDREERDHYSFIAVTM TGTTIEVSIRVNDINDHAPEFPKKKALLKIPEHTAVGTRFSLDPATDADKDQLTTQGYAI KEGNVGHIFKLESKRGANKVLYLDLVVSGLLDREKRSSYSLVIEAFDGGSPRRVGSMTLE VTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAADEDEGDNGLVLYEINRRQSDPE RYFVIDLKSGVITLNRPLDYELKRVHELVVQARDNASQPEVTNAFVTIHVRDFNDNQPTM TIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIY LIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIP EVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKNAHSNWFSIDPITGIITTATALDFESE PAPSVTVIATDGGRPPLSSTAKVDIVVQDVNDNPPVFSRNFYNVSVKENTPAGTCFLEVS ATDEDRGSFGAITYALTSKSGGALQTPFTINKQTGQLCTASALDRDEGLEKYDLTVTATD GGGLSSTVGVRVKVMDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRVT YRTVPGGSSPFFTLNKDTGVISLSRSLHSKANTVISMVISAVDGDGLTAPVNARVNVSIV GGSMASPVFEQAQYFFTVSEDVLRGTAVGVVRAATKTGISKGIYYSISSGDPDGYFTVDS TSGTIRTALPLDHETCSSLDLEIQARSGSPPSYGTSRVHITISDINDNAPTFLPSSSESL LLPEVTKMGTVIYRIQATDKDSSHNGQLSFDLISAGAAGSSGQRTFGVDRGSGEVRLIGS LSYDTVPRYDLQVIAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENTPLNT RFLQVRALNREASGNGGSSSSISSSISYRLRPDGDAAGFGILPDSGWLFVRSSLDREAKD MYLLTVLATSRHGGTGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLLAGTGFGRVS ATDRDAGLNARLTYRLLHADKHFQINSQTGEISTRLALDREQQSSYQLFVVVQDGGTPPR SATGTAHISVLDENDHAPTFTHVRPDRERMFQITEGLPSGTLVGSVTAKDPDEGENGTVY YSLSGSRAERFSLNPNTGELKTASPLRWAERAEYTFTVTAADHGTPGLSSTCQIWIQVIS SSRSIPKPNVLSMTLNVVEGAAPGSIIGSVGQVDKPESNALEGQVTYLVVDGTDRDGTFM VDRLKGDVYLVRELDYEKGSSYTLHIEVSDFSKAFPNSYLVKLEILVQDSNDHAPQFSED PVTIVIPENKEPGASVYTFQAGDQDGSGPNSELRYSIEHQWPQTPGLLTLDPLSGVLTLG QQLDRESTPFLYLVVRATDQAVDPSQRRWGSVTARLFVKDENDNPPVFSSPSAVSVMEDQ PVGFVILHVMARDADEGENGRVSYRIQSGNSAGGFSLSPNTGSLSILKALDREEQEVFNI TIVAEDHGVPQLSTSQVLCVQVIDVNDEAPMFQQAEFGTQVMENKGPGTTVLKVTATDRD QGSNGHITYGGVTEDGFVINPLTGVITTTRELDAEQQNHYVLTVYARDGGLPPNFAKAVV RVEVEDVNDNPPVFAKMWYGLEVPENQAAVELCFIKATDPDSGPGGELEYKIAAGDPDGD FQLHSRTGALSTSRGLDREKRPKYTLEVVAVDKGSPALSATATVEVKVLDINDNSPVFSR NSYAVEVSEDAAEGYQVLQVSATDVDEGLNGKILYFLNQEADGAFAVDEDTGRITTAAPL DREKLASYSFRVFAVDLSPSAPSNSSAQVKVTILDVNDNAPFFIQDPLIVEVSSRRSQRV LATMKAEDKDFGANGSVFYRFATPVKGFGINSLTGEIQATEPLGGLTQAQRTLIVEAMDQ GSPAQSAHGVVVIYVKEVEYNGIRFSKNARDVSIQENASKGTAVAQAQAEYPDGTRQGIS YSLFSGNKKHSFKISSSTGEIWVESSNGLDFEDAPRLRLVVKAETMSSTSFMAFNLVLQD VNDNLPRFQLQNYVAFMKEAQGYEMPIIQVMAEDVDQGQNGQVTYSIQSSSMSGLFKIDP VIGSITTTAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIVDQNDNSPTIPLPQEIR IPENTLIGTEITLVTGNDVDSSPALSYSLQLDPTALGKFGIHRYTGGVSVTGALDFEEKT WYTLTVQATDSQHQTEANITIVVEDINDNAPLFTHDLYQITLPEHTPPGSAVITVTATDR DSGENGRIHYRVMSSTQEGFYIDPSNGTLFINHRAEFDPERPSVNIVIEASDGGSPPLSS LTTVQVHISDINDNAPVFHQSEYRATVSEDTIPGSTLLIFEAFDNDLSRENCGFDFAIAN GNEGNVFQIESSVRFLEGRGFQTVGTLLLAEGLDFETKPLYNLTVVVSDRGVPQRSSSVV ALITIGDVNDNPPVFSRPEYMVALSEGAVSGTEIIRLTATDLDSTPNAEVQYTISSGDEV NLFSIDQWTGALRLQRALDREHQSTHVVIIQASDGQGYFALVPVIVEVKDVNDNHPFFPV ETLTATIQENQPANSPVTVLHAIDHDTGVFGQLKYYMMERSGSGRDSFVVDQNSGEVRSK IPFDFEKINSFNFIAVAVDSGNHSATVTVQVFVTGEDEYDPLFTSTDFAFEVPEGAKKGQ SIGQVLARDEDGGVDGIVLYSLLPSSPYFDVNKTTGVLFLKLDSSSSSSSGSGRTKRETR VMTLDVKAHGPHDTSRSAVAQISIDVTNTNFGLASDVNVLLIVIIAVSLGFVILLVVMAV VIFLVKSRRRKKGQDAGNRAVASGTALKKLDECHSGPAGESIYHQTLPGYAADQGGADGG PYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDA DQLSDISCEPAALEGSTWFKGKKLGGSLSGTLLSGQLPVYRDEGGGYLGVGRGLNISLPK DYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETA QQSQNPRQPFQPKPKIDPKPRIDPPPLITSVAHPGAMSVPPKIPVIGRSFPHLASLRRSP ISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVNQGPSASMISNREPSLDQSPDHEMR I NT seq 9906 nt NT seq  +upstreamnt  +downstreamnt atgacgataacaagtaaagggtcaagacagagagcatgggtcaggggaccccgcatgggt tcaagtctctgtcaacagaagctgttcctctacgtatttgtcatcttgcttcagtcaaca cttgtacttggagtactggagcttcagctggatgaagggcagccggcagggaccatcgtt ggagacatcagtgcggggttaccacctggcgaaactgcaagcctttacttcatctctgac cacgagagcacaggtgttaacagtgaccttaacattgacgaaactacaggtatcatcacc accaggcgccgtttggatcgggaggagcgggaccactacagcttcattgctgtgacgatg acaggcaccaccatcgaagtgtcaatcagagtcaacgacatcaacgatcacgcgcctgag ttccccaaaaagaaggcgctcctgaaaatcccagaacacacagccgtgggaactagattt tctctggatcctgctacggatgcggataaggaccagctgaccactcaaggctacgccatt aaagagggcaatgtaggacacatctttaaacttgagagcaaaaggggggccaacaaggtg ctctatctagacctggtggttagtggactcctggaccgggagaagcgatcgtcgtacagc ctggtcatagaggcgtttgatggcggctcaccaagaagggtgggatccatgaccctggaa gtgacggtgactgatatcaatgaccatgcaccggtctttaatcaaagtagataccatgct atcatctctgaaagtctgccacaaggaagcagcatccttcaggtgtttgcagctgatgaa gatgaaggtgataacggtctggtgctttacgaaattaaccgccgtcagagtgatcctgaa cgctacttcgtcattgatttaaagtctggagttatcactttaaatagacctttagactac gagctgaagagggtccatgaactcgtggtccaggccagagataatgcaagccagcctgag gtcaccaatgcttttgtaactattcatgttcgtgacttcaacgacaaccagccgaccatg accatcatcttcctcagtgaagacggctctcccaggatttcggaaggagctcaaccaggg cagtacgtggctcggatatccgtcactgacccagactacggagagtatgcgaacgtaaat gtgtccctagaggggggcgatggcaagtttgcactcacaaccaaagacagcatcatttac ttaatctatgtggaccaagttttagacagagaagagcgagattcctacgacctcagagtg atggccacagactcgggcacgcctcccctcagggcagaatcctccttcaccatccaagtg accgatgtcaacgacaaccctcctttgtttgaccagcaggcttacagacaaaccatcccg gaggttgtgtaccccggatcctttgttcttcaggtgacagcgagggacaaggaccaaggt cccaatggagatgtgaggtatagcctcctgaagggtaaaaacgcacattccaactggttt tcaatcgacccaatcactggaatcattaccactgctactgctctggactttgagtcagaa ccagctcccagtgtgactgttattgcaactgatggtggccgcccgcctctgtcctccacc gccaaggtggacatcgtggtgcaggatgttaacgataacccaccagtgttctctcgcaac ttctacaacgtctccgtcaaagagaacactccagctgggacatgcttcttagaggtgtca gccaccgatgaggaccggggttcatttggagccataacctatgctttgacttcaaagtct ggaggcgcgctgcagacaccctttaccataaacaagcagacgggccagctttgcacagcc tcagccctcgacagggatgagggtctggaaaagtatgacctgaccgtcacagcaacagat ggaggtggactgagctcaactgtgggcgtgagggtcaaagtgatggacatcaatgacaac cggcccactttctatccagtcctttacactgttagtcttagtacccacagtgcccctgga acctctgttgtcaaggtgacagccaatgatcctgatgctggtgaaaacggcagggttacc taccgcacagtacctggagggagttcccctttcttcacgctcaacaaggacacaggagtg atttctctttcacgctcactgcatagcaaagcaaacacagtcatctccatggtgatatca gctgtggatggcgatggtctgacggcacctgtgaatgccagagtcaacgtgagcatcgtc ggaggctcgatggcgtctccggtgtttgaacaggcacagtattttttcaccgtgtctgag gatgttctcaggggcacggctgtgggagtggtccgtgctgctaccaagacaggtatctct aaaggcatctactactccatctcttcgggagacccagatggatattttactgttgacagc acatctggtaccattcgcacagcacttcctctcgaccatgaaacctgctccagtctggac ctggagatccaggcgcgttccggttctcctccttcctatggaaccagtcgggtccacata accatttcggatatcaatgacaatgctcccaccttcctcccttcctcatcagaatccctt cttttaccagaagtcacaaaaatggggactgtcatctaccgcattcaggccacagacaag gactctagtcacaacggtcagctcagctttgacttgatctctgctggggctgcaggcagc agtggccagaggacgttcggtgtcgatcgtggcagtggggaagttcgcctcattggcagc ctttcgtatgacactgttccacgctatgacctccaagtgattgccaaggatggtggggca cctcagctcagctccaccttcacgcttgttgtccacatccaagcacaagatgctcaaggc cccaactttgacaccctgacgtatcgagtggagctgcgggaaaacacgcctcttaacact cgcttcctccaggtgcgagctctcaacagagaggcttctggaaatggtggcagctcgtcg tctatctcctcctccatttcctaccgcctcagaccggatggggatgcagctggtttcgga atcttgccagacagtggttggctttttgttcggagctctttggacagggaagccaaagac atgtatctactgactgtcctcgccacttccagacacggcgggactgggagaaccggtagt gccactgtcagggttactgtgactgatgagaatgataattccccacgattgagccaggag agagtgttcctggctgtcagggagaacctgctagcaggaacaggcttcggcagggtctcc gctacggaccgagatgcagggctcaatgctcgactcacctatcgactgctgcatgcagac aagcactttcagatcaactctcaaacaggtgagatcagcactcgccttgccttggacaga gagcaacagtccagctatcagctctttgtggtggtacaagacgggggtactcctccacgc agcgccactggcactgcccacatcagtgtgctggatgaaaatgaccacgcccccactttc actcacgtcagacccgacagggagcggatgtttcagataacggaggggcttccatctggg acattagtgggatctgtgaccgctaaagatccagatgagggagagaatggaaccgtatac tactccctatcaggctccagagcagagcgtttctcccttaacccaaacacaggcgagctt aaaactgcttctcccctgaggtgggcagaaagagcggagtacactttcaccgtgaccgct gctgaccatgggacgccgggtctcagctccacctgtcagatatggatacaagtcatcagc tcctccaggtctatccccaagccaaacgtcctctccatgaccctgaacgtagttgagggg gccgcacctggctccatcatcggctctgtgggccaagttgacaagcctgaatctaatgct ctggagggccaggtgacctatttggtagtagacgggacggaccgggatgggactttcatg gtggatcgtctcaaaggggacgtgtacctggtccgggagctggactatgagaagggctca agctacactcttcacatcgaggtgtctgacttctccaaggcgtttccgaacagctacctg gtgaagctggagattcttgtgcaggacagcaacgaccatgccccccagttctctgaagac cctgtcaccatcgtgatcccagagaacaaagaacctggagcttccgtttatacctttcag gctggggatcaggatggcagtgggcccaatagtgaactacgttattccattgagcaccag tggcctcaaactcctggtcttttgacccttgacccgcttagtggggtcctgacgctggga cagcagttggatcgtgagtccacacccttcctctacctggtggtacgagccacagaccag gccgtggatccctctcagaggcgctggggttcagtcactgctcggctgtttgtgaaagat gaaaacgacaaccctccggtgttcagctctccatctgccgtcagcgtcatggaggatcag cccgtagggtttgtgattttgcacgttatggctcgcgatgcagatgaaggagaaaatggc agagtgtcgtacagaatccagtcaggcaacagcgctggtggcttcagtctgagccccaac actggctctctatccatcctaaaagctctggaccgggaagagcaagaagtttttaacatc acgattgtagcggaagaccatggagtaccccagctgtccacgtctcaggtcctgtgtgtg caggtgatcgatgtgaacgatgaagctccgatgttccagcaagctgagtttgggactcag gtgatggagaacaagggtccaggaaccacagttctgaaagtcactgccaccgatcgagac caaggttcaaatggccacataacatacggaggagtgacagaggatggctttgtcatcaac cctctgacaggagtcatcactactaccagggagctagatgcagaacaacagaatcactat gtactcacagtgtatgccagggatggagggctccctccaaacttcgccaaggctgtggtt cgtgtggaggtggaggatgtgaatgacaaccctcctgtctttgctaagatgtggtatgga ctcgaagtcccagaaaaccaagcggctgtggagctttgcttcatcaaggccacagacccg gactcaggtcccggtggggagctggagtacaaaattgcggctggcgatcctgatggagat ttccagctccacagcagaaccggagctctctccacttcacgtgggcttgacagggagaaa aggcctaaatatacccttgaggtggtggcagtggacaaaggcagcccggctcttagcgca actgccacagtggaagtcaaagtgttggacatcaatgacaatagccctgtctttagcaga aatagttacgcagtggaggtttcagaggatgctgcagaggggtaccaagttttgcaggtg tctgcgacagatgtagatgaaggcctcaatgggaagattttgtattttctcaatcaagag gcagacggagcatttgctgtagacgaggacactgggcgaatcaccacagcagcaccgctt gaccgggaaaaactggcatcatatagctttcgagtttttgcagttgatctttcaccttct gcgcccagcaactcctctgcccaggtgaaagttaccattcttgatgtcaacgacaatgct ccattcttcatccaagatccactgatcgttgaagtgtccagcaggcgttcccagcgtgtc ttagccaccatgaaggctgaggataaggactttggggccaatggttctgtgttttatcgc tttgccaccccagttaaaggtttcggcattaactccctgactggggagatccaggccact gaaccactgggcggtctgacacaggctcaaaggaccctgatagtagaagccatggaccaa ggcagcccagctcaatctgcccatggagttgtggtgatttatgtgaaagaagtggagtac aatggaattcgattttcaaaaaatgccagagatgtgagcatccaagagaatgcttccaaa ggcacagctgtcgctcaggctcaagccgaatacccggatggtacacgtcaagggattagc tatagtttgtttagcggaaacaaaaaacattcatttaaaatcagctcctcaacaggtgaa atctgggttgagagctccaatgggttagacttcgaagacgctcccagactccgtcttgtt gtcaaggctgaaaccatgtcatccacatcctttatggcttttaatttggttctgcaggat gtcaatgacaacctcccccgcttccaactgcagaactatgtggcttttatgaaagaagct caaggatatgagatgccaatcatacaggtgatggccgaggatgttgatcagggccagaat ggacaggtgacatattctattcagtcatcaagcatgagcggcttgttcaaaatagaccct gtgataggaagcatcacaacaacagccatcatggaccgtgagatctttacacagaccaag ttagtagttactgcaactgatagaggaagtccaagactagcaggttcagccactctgaca gtgataattgttgaccagaatgacaacagtcccacaattcctttgccccaggagatccgc attcctgagaatactttaataggcacggagatcactcttgtgactggcaatgatgttgac tccagtcctgccctttcctactcgttgcaattggaccctacagccttaggcaagtttggg attcaccgctacactggaggtgtgtcagtcactggtgctttggactttgaggagaagaca tggtacaccttgactgttcaagccacagacagccaacaccaaactgaggccaacattacc atagtcgtggaagacataaatgacaatgcacctttgttcacccatgatctctatcagatt accctacctgagcacacacctcctggaagtgcagtgatcacagtaacagcaaccgataga gactctggagagaacggaagaatccactacagagtgatgtcttcaactcaggaggggttt tacattgatcccagcaacggaactttattcatcaatcatagagctgagtttgaccccgaa cgaccatctgtcaacatcgtcattgaagccagcgatggaggctcacctcctctgtcctct ctgactacagtccaagttcacatctctgacatcaatgacaatgctccagtgtttcaccag tcagagtacagggctacggtttcagaagacaccatcccaggatctacactcttgatcttc gaggcttttgataatgatctatcaagagaaaactgcgggttcgattttgctattgccaat gggaatgaaggaaatgtattccagattgagagcagcgtccgattcctggaaggacgtgga ttccagacagttgggactctactgttggctgagggtcttgactttgaaaccaagcctctt tacaacctcacagtggtggtgtcagatcgcggcgtgccgcagagaagttccagtgtcgtt gcactgataaccattggtgatgtaaacgataatcctccagtattcagcagaccagagtac atggtggctctcagtgaaggggctgtctctgggactgagatcatacgtctgactgcaaca gacctagactcaactcccaatgcagaagtccagtacaccatcagctctggggatgaggtg aacttattttccattgaccagtggacaggagccttgcggcttcagcgggcacttgacaga gagcaccagtccacgcacgtcgtcattattcaagcatcagatggacagggctattttgcc ctggttccagtcatcgtcgaggtcaaagacgtaaacgacaaccatccattttttcctgtg gaaacgctgacagcaactatacaagaaaatcaacccgcaaactctccagtgaccgtcctt catgccatagatcacgacacaggagtttttggccaactcaaatattacatgatggagaga tcagggtcaggaagggacagctttgttgtggaccagaattcaggagaagttagaagtaaa attccctttgattttgagaaaatcaactcctttaattttatagctgtggctgtggattcc ggaaaccattcagccactgtaactgtgcaggtgtttgtcacaggtgaagatgagtatgac ccattgttcacgtctactgactttgcctttgaagtgccagaaggagccaaaaaaggccaa agtatcggccaggtcctagcccgggatgaggacggtggggtggatgggatcgtcctctac tctctgcttcccagctccccatattttgatgtaaacaaaaccactggcgtgcttttcctc aagttggacagttcaagcagcagcagtagtgggtctggtcggactaagcgagaaaccaga gtgatgaccttggatgttaaagcccacggtcctcacgatacatctcgaagtgcagtcgca caaatctctattgatgtcacaaacactaattttggtctggcttctgatgtcaatgtactt ctgattgtcatcatagctgtgtcccttggttttgtcattttacttgtagttatggctgtg gtgattttcctagtgaaatcacggcgcaggaagaagggccaggacgcaggaaacagagcc gttgcttctgggacagctttgaagaagttggatgaatgccactcaggacctgcaggagag tccatctatcaccagactttgccaggatacgctgcggatcaaggtggggccgatggtggt ccctatactagagggggctctctggatccttctcactctagcggaagaggatcggctgag gctgcagaggatgacgagatcaggatgatcaatgaatacccacgagtggcctctatcact tcatctatgcaggagcacatctcagccagaggaccagactctggaatccagcaggatgct gatcaactctctgatatctcttgtgagccagctgctttggagggcagcacctggttcaaa ggaaagaaacttggaggcagcttaagtggaaccttgctctcaggtcagctcccagtctat agagacgagggcggtggttacctgggcgtggggcggggcttgaacatttctcttcctaaa gactatgctttccctgaggatggtaaaccttcagtggatggctccctcactgccattgtt gcaagtgatgaggagcttcgtggaagctataactgggattatttgctcaactggtgccct cagttccaacctcttgcgaatgtatttactgagattgcgaggctgaaagacgaaactgct caacagagtcaaaaccctcgccagccgttccagccaaagcccaaaatagatcccaaacct cgaattgatcctccaccactcatcacatcagtggctcatccaggggccatgtcagtcccc cccaaaatcccagtgattggacgctcattcccccacttggcctcgctgcgaagatcacca ataagtcatgaaggatcaatttcatcagcagcaatgtcaccaagcttctctccatcttta tcccctttggctgctcgatcaccagctgtttcaccatttggggtcaaccaggggccctca gcttctatgataagcaacagggagccctcgctggaccagagtccagatcatgagatgagg atatga

DBGET integrated database retrieval system