Oryzias melastigma (Indian medaka): 112142464
Help
Entry
112142464 CDS
T07439
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112142464
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
DSCAM family
112142464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
112142464
NCBI-ProteinID:
XP_024121642
Ensembl:
ENSOMEG00000004255
LinkDB
All DBs
Position
LG14:11814164..11874967
Genome browser
AA seq
2117 aa
AA seq
DB search
MGGAEAPLVSPPCIAGQQGWKELRGAKSPVQHGDLPGQKNAPHTHQDCQIFLKNIPAIYG
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQKITYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVSDQRSLRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIAPGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVHAG
QSIELPCIAGGYPTPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWYRNTEPIVPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQMVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGYASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMTNGSLLIRHVLEEDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSSPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGPAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPNSVVVSWLPPLKPNGVIRKYTIYCSSPGSGQPAPSEYEANP
EMLFYRITHLSRGKQYHIWAAAVTTAGRGNISAKVTVEPAGKVPAKILSFGGTVTTPWMK
EVRLPCASVGEPAPTIKWTKDSEDSAIPVTADSQKQILSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSTERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQ
PLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTSQLFLSELREAT
WYELKMKACNSAGCGNQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTIG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIAGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRP
GTNPVSRKSIKSAHSSRNRYSSQWTLSRPTQSHSTASARTLTSDWRTMGSHGITATESDS
YSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSD
QMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLP
LYMKTDPFFRKQGELHDPCPAVPPREASIRSLAQRAYHTQGRHKTLDPSKQQTLTLGHSG
LGSLGASSGTATLPQRTLTMPSSNNAATASTSSTSSNPSNSNKVGGSRDSLLESSSSALG
RLQKQSVGAYSKSYTLV
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggccgaggcgcctctcgtttcccctccatgcatagcggggcagcagggctgg
aaagagctccggggagcaaagtcgcccgtccagcacggagacctgcctggccagaagaac
gcgcctcacactcaccaggattgccaaatattcctgaaaaatatacctgctatttatggc
atgtggcttgtaactttactcctgctgtactctctccaggaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaatgcctccctgcagaagataacctactccagctca
gtgggggtgtccctgccctgtcctgcagggggcacccccagtgccattctgcgctggtac
ctggccaccggcgacgacatttacgacgtgccccacatccgccatgtgcacgccaacggt
actctccaactgtaccctttctcgccctccgcctacaacagctacatccatgacaacgac
tacttctgcaccgccgaaaaccaggcgggcaaaatccgcagccccaacatccgcatcaaa
gccgttttcagggagccctacactgtgcgggtgtcggaccagcgctcattgaggggcaac
gtagctgttttcaagtgcctcatccctgctgccgtgcaggagtacgtcagcgttgtatcc
tgggaaagagacactgtttccatagctccaggtaacagattctcgctgacctcctttgga
gctctttacatctctgacgttcagaaagaggatgccctctccacatatcggtgcatcacc
aagcataagtacagtggcgagacgcggcaaagcaatggagctaggttgtcagtaatggac
cccaatgagtcctcacccactatcctggatagtttccaagcaggagaagtgcatgcaggc
cagagcatcgagctcccctgcatagcaggtggttatcctacacccactgtgcgctggctg
aaagatggtcgcccgctgccttcagatgcccgctggacacggcgcttgacagggttgacc
atcagtgacctgaggcaggaggacagcggcagctacgcctgcgaggtcaccaacagcttt
ggctccaaggaggtgtctggacagcttcacgttatcgatcctctgcgggtgaccttgtct
ccgaagaatttaaaaacgggcatcagcagcacactgttcttcacgtgcactgtggagggc
tctccagaatacaccatcacctggtacaggaacacagagcccatcgtcccagaccagcac
atctccatccagggacaacacaacgacactctccagatcactgctgctcagaagttccac
tctggagcctaccagtgctttgcatcccgaaagggccacactgctcaggacttttccatt
attttactagaggatggtactcctcgaattgtgtcttccttcagcgagcgggtggtgaac
cccggtgagcctttctccctcatgtgtgccgccaaaggagccccgcccccttcaatcact
tggacattggacgatgagcccgtggtgcgagattccacctacaaaaccagccagtacact
ttgtcagatggcctgacggtgtcgcacgtcaacgtcagcagcccgctcatccgggatgga
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccacctcgaataagacccatgcgagatatcactgcagtggcgggcaga
aacacctatatcacatgccgggtgattgggtacccgtattattccataaagtggttgaaa
gacggcatgcagctacctgataatcatcgtcaaatggtgtttgagaatggcaccctgagg
cttacagacgtgcagaagggcgctgacgaggggacgtacttgtgtagtgttttgatccag
ccccaggtctcaattaaccagaccgtccacgtcactgtcaaagtgccaccgctcatccag
ccattcgatatcccctctacctcagtggggaagctcatgtacattgcctgcgtggtgtct
tctggggacatgcccatacgcatcacttggcacaaagacggtcagctcatcgtgccaggc
tacgcctctggcgtcggaattgagaccaaagagttcatgagctccctgcagatctccaag
gtgacactgaagcacaacgggaactacacctgcatcgctagcaacgccgccgccacagtc
agctgggagaggcagctgattgttactgtgccaccacgttttgtggtgcagcctaacaac
caggactgcatatatggaaaggccggagtcctgaactgctcagtagaaggttatccacct
ccaaaagtcatgtggaaacacgctaaaggagttggaaacccacagcaataccatccagtt
ccactcactggccgcatccagatcatgacaaatggctctttgcttattcgacatgttctt
gaggaagacagagggtactacctctgtcaggcctctaatggtgtgggctcagacatcagt
aaaagcatgatcctcactgtcaagattcctgccatgatcaccagccaccccaacaccacc
atggcaagaaagggccaaaccaaggagctgaactgcacagcacgaggcgagcagcctatt
attatccgctgggagagaggggacacagtcattgatgcagagagaaacccccggtactcc
atcaccattaacaagaagggtgatgaagtcatctccaccctaaagttgaatccagccgaa
cggggagactccgttttcttctcctgccatgccataaactcctatggagaaggccgaggg
ctcatccagcttacagtacaagaaccaccagatcctcctgagctggaagtcagagaggtg
aaggaccggagcatgaacctgcgctggatccaaaggtttgatggcaacagcatcattacc
agttatgacattgagtacaagaacaagtcagactcctgggaccacatgtacaccaccagg
aacatttctccaacgaacaaccaagccaacatcgtggagttgcaccctgcctgtgtctac
agcatccgcatgtattcctacaacaagatcggacgaagctcaccaagcaaagagctcacc
atcagtacagaggaagcacctcctgacgggccaccaatggatgtcatcctccaaccaatg
acatctcagagcatcagagtgacatggagggcgccaaagaaggagctgcagaacggtgtg
atccgaggttatcagatcggatacagagaaaacggccccggtagcaacggccagtacagc
atagtggagatgaaagctacgggtgacagtgaagtgtacactctggacaacctaaagaag
tttgctcagtacggggtggtggtccaggctttcaacagagccgggacaggcccgtccagc
acggagattaacgccaccacgctggaagacgtccccagtgagcccccccagaacgtgaga
gccatctcagtcacgtcggacgaagcggtgatcacgtggtctgagcctccacggctgacg
ctccacggcgtcctgaagggctaccgggtcgtgttttggtccctcttccctgacggaggt
gggtgctgtgggggcccggcccagtggccaatgcagaaatggggcgagatgcagaacatc
accaccacgcgtgagcaggtggagctgcgagggcttgagaagttcaccaactacagcgtg
caggtgctggcctacacacaggcgggggacggggtccgcagcaacgtcctgtacatccag
acccgcgaggaccttcccggtccaccagctggcatcaaggctgttccttcgtctccgaac
agtgtggtggtatcctggttacctcctcttaagcctaatggtgtcatccgcaagtacaca
atctactgctccagtcccgggtctggacagcctgcgcccagcgagtatgaggccaaccca
gagatgctcttctatcgcatcacgcacctcagccggggtaaacaataccacatctgggcg
gccgccgtgacaactgccggccgaggcaacattagcgcaaaggtcacagtggaacctgct
gggaaagttccagctaagatcctgtcctttgggggcacagtgaccacaccgtggatgaag
gaagtgcgtctgccgtgcgcatcggtcggagagcccgcccccaccattaaatggaccaaa
gatagcgaggactcagccattcctgtgacagcagacagccagaaacagatcctatccaac
ggcactctggtgctgcgctcagtcaaagccgaggattctgggtattacacctgtactgcc
actaacaccctgggctttgacaccattatagtgaatctggtggttcaagttcctcctgat
cagcctcgactgactgtatccaccacttccacctcctccatcaccttggcttggattcct
ggagacaacggaggaagctccattagagggtttgtgctgcagtattctgtggacaacaca
gaggagtggagggacgtgttcatcagctccacggagcgctcgttcaggctggacaatctc
cgctgtggaacgtggtacaaagtcaagctggctgccaagaacagcgtgggctccggacgc
atcagcgagatcattgaggccaagactcacgggagagaaccggtgttcaacaaggaccag
ccgctgctcactcacattaactccacccatgcgggactaaacctgcagggttggaccagc
ggcggctgccccatcaccgacctgatgctggacttcaggcccaaaggcacgtgggcctgg
cagagcctcaaagccaactccacctctcagctgttcctcagtgagctccgcgaggctacg
tggtacgagctgaagatgaaggcctgtaacagcgccggctgcggaaaccagacctcccag
tttgccacgacagactacgatggaagtaccatccctccaattaagtctgcccgtggagag
ggtgatgacgtgaagaagctgttctccatcggctctcctgtcattctcgttaccataggc
gtcgctttgctttttattatccgcaagaaacgtaaggagaagaggctgaaacggctcaga
gatgctaagagtctggctgagatgctgatcagcaagaacaaccgcagcattgacaccccc
gtgaaggggcccccccaggggccgaggctccatatagacatcccacgagttcagctgctc
atcgaagacaaggagggcatcaagcagatagcaggagaggacaaggcggcggtgccggtg
acggacacggagttcagccaatcggtgaatccgcagaacttctgcacaggcgtttctctg
caccaccaggccctcatccagaactcagggcctctgatcgacatgtcagacatccggcct
ggaacgaatcctgtgtccagaaaaagcatcaagtcagctcacagctccagaaacagatat
tccagccagtggactctcagccggccgactcagagccattccacggcctcagcacgaacc
ttgacctccgactggcggacaatgggctcccatggcatcacggccacagagagcgacagc
tacagcgccagtctttcccaagatacagataaggggcggaacagcatggtgtccacggag
agcgcctcatccacctacgaggagctggcgcgagcctacgagcacgccaagctagaggag
cacctgcagcacgccaagttcaccatcacagaatgtttcatctccgacagctcgtccgac
caaatgaccacgggcaccaacgacccggcagacagcatgacctccctcagcacgccgtct
gaaccaggcatctgccgctttaccgcctcgccgcccaaaccgcaggactatgaccgcggt
aagaacgtggcagtgcccatcccccaccgcgccaacaaaagtgaattctgtaatttaccc
ctctacatgaagacagacccgtttttccgaaagcaaggggagctgcacgacccgtgcccg
gcagtaccgccacgggaagcctcgatccgcagcctggcgcagcgggcgtatcacacccag
ggccgccacaagactctagacccttccaagcagcagaccctgacgctgggccattctggg
ctgggcagtttgggcgcgagctcgggcactgccaccttaccacagaggactctcaccatg
cccagctccaacaacgcagcgacagcttccacctccagcacgagcagcaacccctccaac
agtaacaaggtggggggctccagggactcgctgctggagagtagctcctctgcactgggg
agactgcaaaaacagagtgtgggagcctactccaagtcgtacacacttgtgtag
DBGET
integrated database retrieval system
