Oryzias melastigma (Indian medaka): 112142554
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Entry
112142554 CDS
T07439
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112142554
04082 Neuroactive ligand signaling
112142554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112142554
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112142554
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112142554
NCBI-ProteinID:
XP_024121762
Ensembl:
ENSOMEG00000004814
LinkDB
All DBs
Position
LG14:21585099..21644874
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AA seq
517 aa
AA seq
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MRTLCVCFLLFVVAVARTQSVGVNDPSNMPLVKETVDRLLKGYDIRLRPDFGGPPVRVGM
NIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLN
DKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYT
TDDIEFYWRGGVSAVTGVDRIELPQFSIVDHKLISKNVVFSTGAYPRLSLSFKLKRNIGY
FILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKA
IDVYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKTAIANNEKMRMDPNKWLVGN
VVGRDDTLYARMKQRDLDGHDSMWEPIFVDDAAIGLGDQKNKMDPHENILLGTLDIKNDM
GVTELALGLNDPRNTMLTYDSSNLQYRKAGLARHNFGRNALDRHMTQKKSRLRRRASQLK
ITIPDLTDVNSIDKWSRIIFPTVFSFFNIIYWLYYIN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaggacactttgcgtctgtttcctcctcttcgtagtagcggtggcgcgcactcaaagt
gtcggtgtcaatgaccccagcaacatgcctttggtcaaagagacggtggataggctgttg
aaaggttatgatatacgattgaggccagatttcggaggaccaccagttcgagtgggaatg
aatatagacatagcaagcatagacatggtgtcagaagtcaatatggactacacactgacg
atgtacttccagcaggcctggcgagacaagcggctgtcctactctgagatccctctcaac
ctgaccttagataaccgcgtggccgaccagctttgggtccccgacacctacttcctcaac
gacaagaaatcgttcgtccacggcgtcacggttaaaaaccgaatgatccgactgcatccg
gatgggacggttctgtacggtctaagaatcacaactacagctgcttgcatgatggacctg
agaaggtatccactagatgagcaaaactgcacactggaaatagagagttacggttatacc
acggacgacattgaattctattggcgaggaggagtcagtgctgtgacaggggtggacagg
attgagctgccccagttttccatcgtggatcataaactcatctcaaagaatgtcgtcttc
tccacaggtgcttatcctcggctgtccctcagttttaagctaaagagaaacattgggtac
tttatcctgcagacatatatgccttccatcctgatcaccatcctctcctgggtctccttc
tggatcaattatgatgcctctgctgccagagtagctctaggtattaccactgtgctcacc
atgacaaccatcaacacccacctgagagaaacccttcccaaaatcccatacgtcaaggcc
atagatgtgtacctcatgggctgcttcgtcttcgtctttctggctctgttggaatacgca
tttgtcaactatattttctttggccggggcccacagcgacagaaaagggcagctgagaag
acggccatagccaacaatgaaaagatgaggatggatccaaacaagtggcttgtgggaaac
gtagttggtagagatgataccctgtatgctagaatgaaacagcgagatctggatggtcat
gattccatgtgggagccgatctttgtggatgatgcagctattggacttggtgatcagaag
aacaagatggacccacatgaaaacatcctcttgggtaccttggacatcaagaacgacatg
ggtgttacagagctggctttgggcctcaatgacccaagaaataccatgctaacttatgac
agctccaatctgcagtaccgcaaagcgggcttagccaggcacaactttggccggaacgcg
ctggaccgccacatgactcagaagaagagccgactacggaggcgggcttctcagttaaaa
atcacaataccagacctcactgatgtaaactctattgacaaatggtcgaggatcatcttc
ccaacagttttctcttttttcaacatcatctattggctttattatataaattag
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