KEGG   Oryzias melastigma (Indian medaka): 112142558
Entry
112142558         CDS       T07439                                 
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04145  Phagosome
oml04210  Apoptosis
oml04530  Tight junction
oml04540  Gap junction
oml04814  Motor proteins
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112142558
  09143 Cell growth and death
   04210 Apoptosis
    112142558
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112142558
   04540 Gap junction
    112142558
  09142 Cell motility
   04814 Motor proteins
    112142558
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112142558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112142558
   03036 Chromosome and associated proteins [BR:oml03036]
    112142558
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112142558
   04147 Exosome [BR:oml04147]
    112142558
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112142558
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112142558
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112142558
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112142558
  Exosomal proteins of other body fluids (saliva and urine)
   112142558
  Exosomal proteins of colorectal cancer cells
   112142558
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 112142558
NCBI-ProteinID: XP_024121767
LinkDB
Position
LG14:24219720..24222055
AA seq 458 aa
MKKQLGNNIKTSPREETPLLHFCTRFIKVSKWKLAASFYNFYFFKEKNNYSENMRECISV
HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGRGDDSFNTFFSETGAGKHVPRAVF
VDLEPTVIDEVRSGNYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD
QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVENRLI
SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
TNACFEPANQLVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
GMEEGEFSEAREDMAALEKDYEEVGADSLEEDDEGEEY
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaagaaacaactcgggaacaatataaaaacttcgccaagggaggaaacgcctctactt
cacttttgcaccagattcattaaggtctccaagtggaaactagcggcgtctttttataat
ttttatttctttaaagaaaaaaataactactctgaaaatatgcgtgagtgtatctcggtg
cacgttggccaggctggtgtccagattggcaatgcctgctgggaactctactgtctggag
catgggatccagcctgatgggcagatgcccagtgacaaaaccattggcagaggagacgat
tctttcaataccttcttcagtgagacgggagctggaaagcacgttcccagagccgtgttc
gttgacctggagcccacagtgatcgatgaagtgcgctctgggaactaccggcagctgttc
caccctgagcagctgatcactggcaaggaggatgctgccaacaactacgcccgtggacac
tacaccatcggtaaagaaatcatcgacctggttctggacaggatccgcaaactggcggac
cagtgcactggtcttcagggcttcctggtgtttcacagcttcggtggaggcaccggctct
ggcttcacctctctgctgatggaacgtctgtctgtggactacggcaagaagtccaagctg
gagttctccatctaccctgctccccaggtgtccactgctgtggtggagaaccggctgatc
agccagatcgtgtcctccattactgcttctcttcgttttgatggtgccctcaatgtagat
ctgacagagttccagaccaacttggtaccatatccccgaatccacttccctctggccacc
tacgcccccgtcatctctgcagagaaagcttatcacgagcagctttcagtcgctgagatc
acaaatgcctgctttgaaccagcaaaccagttggtcaagtgtgatcctcgtcgaggcaag
tacatggcctgctgccttctgtatcgtggggatgtggtacccaaagatgtaaatgctgcc
attgccgccataaaaaccaagcgctccatccagtttgtagattggtgccccactggtttc
aaggtgggcatcaactaccagcctccaactgtagtacctggtggtgacctggccaaggtg
cagagagccgtgtgcatgctcagcaacaccactgctattgcagaggcctgggctcgtctg
gatcacaagtttgacctgatgtacgccaagcgcgcatttgttcactggtatgtgggtgaa
ggtatggaggagggggagttctctgaggccagggaggacatggcagctctggagaaggat
tatgaggaggttggagctgatagtttggaggaggacgatgagggagaagaatactaa

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