Oryzias melastigma (Indian medaka): 112142558
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Entry
112142558 CDS
T07439
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04145
Phagosome
oml04210
Apoptosis
oml04530
Tight junction
oml04540
Gap junction
oml04814
Motor proteins
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112142558
09143 Cell growth and death
04210 Apoptosis
112142558
09144 Cellular community - eukaryotes
04530 Tight junction
112142558
04540 Gap junction
112142558
09142 Cell motility
04814 Motor proteins
112142558
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112142558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112142558
03036 Chromosome and associated proteins [BR:
oml03036
]
112142558
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112142558
04147 Exosome [BR:
oml04147
]
112142558
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112142558
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112142558
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112142558
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112142558
Exosomal proteins of other body fluids (saliva and urine)
112142558
Exosomal proteins of colorectal cancer cells
112142558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112142558
NCBI-ProteinID:
XP_024121767
LinkDB
All DBs
Position
LG14:24219720..24222055
Genome browser
AA seq
458 aa
AA seq
DB search
MKKQLGNNIKTSPREETPLLHFCTRFIKVSKWKLAASFYNFYFFKEKNNYSENMRECISV
HVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGRGDDSFNTFFSETGAGKHVPRAVF
VDLEPTVIDEVRSGNYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLAD
QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVENRLI
SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEI
TNACFEPANQLVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
GMEEGEFSEAREDMAALEKDYEEVGADSLEEDDEGEEY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaactcgggaacaatataaaaacttcgccaagggaggaaacgcctctactt
cacttttgcaccagattcattaaggtctccaagtggaaactagcggcgtctttttataat
ttttatttctttaaagaaaaaaataactactctgaaaatatgcgtgagtgtatctcggtg
cacgttggccaggctggtgtccagattggcaatgcctgctgggaactctactgtctggag
catgggatccagcctgatgggcagatgcccagtgacaaaaccattggcagaggagacgat
tctttcaataccttcttcagtgagacgggagctggaaagcacgttcccagagccgtgttc
gttgacctggagcccacagtgatcgatgaagtgcgctctgggaactaccggcagctgttc
caccctgagcagctgatcactggcaaggaggatgctgccaacaactacgcccgtggacac
tacaccatcggtaaagaaatcatcgacctggttctggacaggatccgcaaactggcggac
cagtgcactggtcttcagggcttcctggtgtttcacagcttcggtggaggcaccggctct
ggcttcacctctctgctgatggaacgtctgtctgtggactacggcaagaagtccaagctg
gagttctccatctaccctgctccccaggtgtccactgctgtggtggagaaccggctgatc
agccagatcgtgtcctccattactgcttctcttcgttttgatggtgccctcaatgtagat
ctgacagagttccagaccaacttggtaccatatccccgaatccacttccctctggccacc
tacgcccccgtcatctctgcagagaaagcttatcacgagcagctttcagtcgctgagatc
acaaatgcctgctttgaaccagcaaaccagttggtcaagtgtgatcctcgtcgaggcaag
tacatggcctgctgccttctgtatcgtggggatgtggtacccaaagatgtaaatgctgcc
attgccgccataaaaaccaagcgctccatccagtttgtagattggtgccccactggtttc
aaggtgggcatcaactaccagcctccaactgtagtacctggtggtgacctggccaaggtg
cagagagccgtgtgcatgctcagcaacaccactgctattgcagaggcctgggctcgtctg
gatcacaagtttgacctgatgtacgccaagcgcgcatttgttcactggtatgtgggtgaa
ggtatggaggagggggagttctctgaggccagggaggacatggcagctctggagaaggat
tatgaggaggttggagctgatagtttggaggaggacgatgagggagaagaatactaa
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