Oryzias melastigma (Indian medaka): 112142584
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Entry
112142584 CDS
T07439
Symbol
gabra3
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112142584 (gabra3)
04082 Neuroactive ligand signaling
112142584 (gabra3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112142584 (gabra3)
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112142584 (gabra3)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112142584
NCBI-ProteinID:
XP_024121816
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Position
LG14:complement(8636670..8804225)
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AA seq
480 aa
AA seq
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MATLPWRGKSQDLALWVLLLLLNLLPETRAVVGHREPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGETVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVAVAEDGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEGMEI
REPFQANMARIKDMRRESATLAKKSNNTFNIVGTTYAMNVAKDQGLTTISKSAGGATAKH
SFLHKMDDPYTEAKKSYNRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNLN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccactctaccctggagaggtaaatctcaggacctggccttgtgggtgctcctcctg
ctcctcaacctccttcctgaaaccagggctgtagtcggacacagagagccgctccccgat
gacagcaaagacaacatcaccatttttacccgaatccttgacaggctgctggatggttat
gacaacaggctacgtcctgggctgggagaaactgtgacagaagtgaggacaaacatctac
gtgacaagtttcgggccggtgtcagacacggacatggagtacactattgatgtcttcttc
cgtcaaagttggagagatgagaggctgaagttcgatggacccatgcaggttctccctctc
aacaacctgctagccagtaagatttggactcctgatacgttcttccacaatggaaagaaa
tcggtggcccacaatatgacgactcccaacaagcttctgcgattggttgataacggaact
cttctctataccatgaggttgaccattcatgcagagtgccccatgcacctggaggatttc
ccaatggatgcacacgcctgtcctctcaagtttggaagctacgcgtacaccaacaacgag
gtgatctacctgtggacccagggggatgagaggtctgtggctgtggcagaggacggctcc
aggctgaaccagtatgatttgctgggacacgttattggaaaagaaaccatcagttccagc
acaggagaatatgtagtgatgacgacgtatttccatttaaagaggaaaattggctatttt
gtaattcaaacctaccttccgtgcatcatgactgtcatactgtctcaggtctccttctgg
cttaacagagaatcggttccagcccgcactgtgttcggggtcaccacagtcctaaccatg
accaccctgagcatcagtgccagaaactccctccccaaggtggcctacgccacggccatg
gactggttcatggccgtgtgctacgcctttgtcttctctgccttgattgaatttgcgaca
gtaaactacttcaccaagcgcagctgggcgtgggacgggaagaaagaaggcatggaaata
agggaaccgtttcaggctaacatggcaaggattaaagatatgagaagagaatctgccact
ttggccaaaaaatcaaacaacaccttcaacattgtcgggaccacttatgccatgaacgtg
gctaaagaccaaggcctaacgaccatttccaagagcgccgggggagccaccgccaaacac
tcctttctgcataaaatggatgacccctacacagaggccaagaagtcctacaaccgtgtc
agcaaagtggacaagatttcacgcatcattttcccagtgctgttcttcatcttcaacctg
ggctactgggcgacatacgtcaacagaaagcctgccatcatgaaggccaacaacctaaac
tga
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