Oryzias melastigma (Indian medaka): 112142612
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Entry
112142612 CDS
T07439
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112142612 (gabra6b)
04082 Neuroactive ligand signaling
112142612 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112142612 (gabra6b)
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112142612 (gabra6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112142612
NCBI-ProteinID:
XP_024121861
Ensembl:
ENSOMEG00000004845
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All DBs
Position
LG14:complement(21538036..21570654)
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AA seq
474 aa
AA seq
DB search
MLIAKVDSGFVVLGSLRGMALLLTCLFLLCYSTISVWGNQHSETSIYLDNITRILDRLLD
GYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFDGPIEIL
RLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLM
NFPMDGHACPLKFGSYAYPISEIVYTWKKGPSSSVEVPQESSSLLQYDLIGQTVSSERLK
SNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVL
TMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA
MKAAAQEAAAAAAAAATGNDGEVSSVDASSVLKKRMNSTPLFERPAKTFPNPPVNAQAFL
QQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgctaaagttgactctggatttgtagttttgggctctttgcgaggcatggct
ctccttttaacttgcttattcctgctttgttacagcacgatcagtgtttgggggaatcag
cacagtgagaccagtatctacttggataacatcacgcgtatattggatagattactggat
gggtacgacaaccgtctacgacctggatttggagggcctgtcacagaggtcaaaactgac
atatttgtcaccagctttggacctgtatcagatgtggagatggaatacaccatggacgtg
ttctttcgtcagacgtggatcgacgaacggctaaaattcgacggtccaatcgagatcctg
cggctcaacaacctgatggtcagcaagatctggacccctgacaccttcttccggaatggc
aagaggtcgatttctcacaacatgaccacccccaacaagctgttccgcattatgcagaac
ggaacaatcctctacaccatgagattaactataaatgcagagtgccctatgcgtctgatg
aacttcccaatggatggacatgcctgcccactcaagtttggaagctatgcgtaccccatc
agcgagattgtgtacacatggaagaaggggccgtcgtcgtctgttgaagttccacaggag
tcttccagtttgttgcagtatgacctcataggtcaaaccgtgtcaagtgagagattaaag
tcaaacacaggtgaatatgtcatcatgacggttcactttcatctccaaagaaaaatgggt
ttcttcctgattcagacgtacattccctgcataatgaccgtcattctggctcaagtctcc
ttttggattaataaggaatcggttcctgctcggactgtttttggtatcacaaccgtcctg
acaatgacgactctcagcatcagcgcccgccactccctcccaaaagtttcctacgccaca
gcaatggactggttcatagccgtttgcttcgcctttgtcttctctgctcttattgagttt
gcggctgtcaactacttctccacccttcaggccaatcgggaactgcggaaagcagcagcc
atgaaggcggcagctcaagaggcagcagctgcagccgcagctgcggccaccgggaacgat
ggcgaggtttcatcagtggatgccagcagtgtgctgaagaagagaatgaactccacccca
ctgtttgagcgtcctgccaaaacatttccgaacccacctgtcaatgctcaagctttcctg
cagcaaggttcagcagtcccggccaacaatgttctgactggcaccagcatcattgacaaa
tattcccgtatcctcttccctctttcatttggcgccttcaacctggtctactggattgta
tatctcaccaaggacactatggagatgtccagggacaccatctaa
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