Oryzias melastigma (Indian medaka): 112142743
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Entry
112142743 CDS
T07439
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112142743
Cilium and associated proteins [BR:
oml03037
]
Motile cilia and associated proteins
Sperm associated proteins
112142743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
112142743
NCBI-ProteinID:
XP_024122059
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All DBs
Position
LG14:complement(18367183..18391322)
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AA seq
2455 aa
AA seq
DB search
MNFPASHYGDLDDRNPVLIAFRRDIKSLVSLMKRPDGGAQVKGVRLLVEIWKQYKHRLPA
KCYQDQMLQTADFLSEIKMHEVALWQGYSLHLQQFSSEEITDISDLEHFHACFFPEGLDV
DQDVVSMKVRAMLGCALCTFELEKKHGVLKQKGLCKLLRVLSFIRIMMQAFQQHDHLSWH
IYNGSSLIYNICRYLMTMNCSAEALEYLLWASISVELSVPLMTAKYLPLSVTLYCAGCYC
YYDNQAAAQAEEFARRALGKINERAEEEEQSDTATSTEAQRAYKEASIKLSSLVFKRAVF
EGRRPKYKTRIQSKSSLKDFASGPRPRTSTEKLLTSMFDSTAGQFLGILEALWDSSTRPL
QTRILGDVELQEIALELLSAGVRILSGSPGEQKCEEHLVLNPIILTPTSTLIELAVTGEH
RIPITSAVRFLKLLFQYKQLDVFADLSKQMLHILSDVKGQAFRKAERELALLHSYSSLFF
QKGRLRDHISDVRSKSSVFLTDEISALVNTLQMSICGADPELHPDVDLVLDVILFLWNQV
KMVMQNDQLQASEFSQCEQRTDSYHKWLWCLSVLCEVALACPLATVNCTMTAEMICTLAI
QLEKASGSTRGPVFGSMEMTNAQLLQRVHDMVKKGLLSLSKGVSALIPQDLSAVTDSAFF
QKLGPLHPPSASAEEIKRMNENRWKNTEGEEPEVEFEPSTNVFLLARDLHLELEIILHRV
SVKLLHLHSVEKPELMDWIKNNKVSKALFLIQKALLEHDSEMMTDSNTTTNLLEEAFSLM
EKAELEEKKLYMTLCQTKQKPHQEGKAPKPKGESPPPAPVLLSRTDHTFTFAPAPYDLGE
QVCWYQLFGRVAEGINKTVRLNDCILPGTGLMVLVGSGGCVMRVEGLQPNQKYVFAVAAY
DSEGRLLGNSIGQTTVPLLASVPVQLLATWAHLAQAAFQTNQYAAAKRACRKLWSHYIHP
SSKSSSLWDRLTATSLHKATIQQSSPHLCNLVLTSIFIETEISIQEGALRCETLSNSSPF
VWDQDARLAECDRMLVAIDLALCLNDGSSAVQAVVTCYGLLAPLMFHQIIHGNVVQVLQK
CLLVLEENSGVLIHSWTGATTESLLYMTACITFYLSKVLRLLRKHQLAAAVLDRGRRLLQ
EATDARLQMSKHSSKAKTTGADGTVSDSVMIRRQFQALNTKQRRSRSTCEAEVTSGNCPP
APTVPEDPMVLCDLIYSCTLQEAHQEVMKIKWKTYFLEFAALFLQRTLEEGHPDLVLKWG
ENILQFLFRRDEMMGLSSKHLEAKNSKGGAETDTPQQNKMSVPHEELRKKLKKKLPCSMM
RHVKTYRELCTVDNLLTMMSDVVRRSKKRLQLRNLCWEERPWRCQVHRCMAQAHLAAAHR
DMETLQHSYSQFDPLYFSLAFTGLLIKKRPSSRHKSEGIPCPSDLGEQEEKREKKVVRFD
TSGERCVEGGRFSPTVDLQIDRNSPVNSLKLAASHLRRSMVLAHRGGDWTLLLCVCHTVW
SHSCKITSQLEAPPPFTEDQLQHIFTPLLVLATDLVMDMLNKLELWSLYDRDSTEEELES
SVHFSAPLDDGSQVDLRWVRSLVLHTLERLHSCEKWESLSHFALLFNSYTRERYALIVAP
LLLHAQRSLIERIRSVGGPAIPQPHHVKTQQSTGKEVTNRSYFHCQLLSGWSPSELPIDE
DTSHTNVFPRDGASLKAAEKQRSLSLVCVPLDVEDTLSGYHRALQKTPHCLQVLQHSRSL
LLLLLANTQPYLTQLQSAGRVSCSPVVKPTPNIRPCEPSGEDFSTPDAIFGLPVRPDCIP
TVVASYSNSIKCLRASGHKSLSLLALRDMGNLHFYAGNVQAAQSCWIQAVDCALQSSGVV
QKWDGVSFGGGSMPKTVKHAGVWGCLQAAVIAAKIAQFILTSDINQRTKCCLLSSHLFKC
VLGCSMAQPQLDLQYASHTIREELLPGVDLFSEPRRLHVSSVVSSLHFVCRWLFMTGHHI
TLLPLLALYLHFVGPVCRDVRRTVEGKILKVRVLTELRMFSEAVMEVIQLTQGAGIFLPC
GPFMAKTDLQPMATFYNNKSLLDNKEAVETLMNCDFAPEIQTMYGPSLCTSFSLARVQLV
LALSETLRGLPDPDPKDSHATILVESESSVKERADEEPKPPKQKTFLLCHEESQLTSERI
KIVLLEAASSLLTSTTEQLASLPCSEEEKLELTVESSLLKANLHLQQGRPKLSFDAAVSS
LVLLQTSPVTIGASNSELTEVLQDPVMDTQPRDCPGAAEAAERIGPSLWLRCRLALVQSL
VASIHTDATLLPGKNINEETARLLQEGIEECVGWGDRDTQALLLMESAELEALRGKTQES
VAVLQEAVALLSEPACMPPGSMLTLARAALLLNDIQEHQSSSLLQVTRKLLDMQMRLFGQ
SVDDKVGVCPPGSDNIYLPYITMLKEITLRIDSMENSDNKDQPTSSVGGQTLHLI
NT seq
7368 nt
NT seq
+upstream
nt +downstream
nt
atgaactttccagcttcgcattacggtgatcttgatgataggaatcccgtcctcatcgct
ttcagacgggacatcaagtcgttggtgtcgttgatgaaacgtccggatggtggcgcacag
gtgaaaggggtcaggcttcttgtggagatttggaaacagtacaaacacagacttccagca
aagtgctaccaggatcagatgctgcagactgcagacttcctgtctgaaattaagatgcat
gaggttgctctgtggcagggctacagcctgcacttacagcagttcagctcagaggaaatc
acagacatcagtgatttggagcacttccacgcctgtttcttccctgaaggccttgatgtg
gaccaagatgttgtttccatgaaggtccgtgcgatgcttggctgtgccctctgtactttt
gagctggagaagaaacacggcgtcctgaagcagaagggactctgcaaactcctgcgtgtg
ttgagcttcataaggatcatgatgcaggccttccagcagcatgaccacctctcctggcac
atatacaacggctcgtcactcatttacaacatctgccgttacctgatgactatgaactgc
agtgcagaggccttggagtatcttctgtgggcaagcatcagcgtggagttgtctgtcccc
ctgatgacggccaaatatctgcctctgagcgtcactctgtactgtgctggctgctactgt
tactatgacaaccaggctgcggcgcaagcagaggaatttgccaggagagctctgggaaaa
attaatgaacgagcagaagaggaggagcagagtgacactgccaccagcacggaggctcag
agagcttataaagaagcttctatcaagctcagtagcctggtgttcaagagggcagttttt
gaaggcaggagacccaaatacaagacgagaatccaatccaaaagctccctgaaagacttt
gccagtgggcctagacctcgcacttccacagagaagttgctgacgtccatgtttgactcc
accgcggggcagtttctgggcattttagaggctctttgggacagcagcacacggcccctg
cagacgaggatactgggcgatgtggagctgcaggagatcgccctggaactgctgtccgcc
ggcgtccgcatactatccggatctccaggtgagcagaagtgtgaggagcatctggttctt
aatcccatcatcctgacaccgacttcaactctaatagagctggcagtgacaggtgaacac
aggattcccatcacctcagctgtgaggtttctcaagttactgtttcagtacaagcagttg
gacgtctttgctgacctttccaaacagatgctacacatactgtcagatgtgaaaggtcag
gctttcaggaaggccgagagagagctagctttacttcacagctacagcagtttgttcttc
caaaaaggccgactcagagatcatataagtgacgtcagatccaagtcttcagttttcttg
actgatgagatctctgctctggtaaacaccctgcagatgtccatctgtggcgctgatcct
gagctgcatccagatgtcgacttggttttggatgtcatcttattcctatggaatcaggtg
aagatggttatgcagaatgatcagcttcaagcgtcagagttttcacaatgtgagcagagg
acagacagctatcataagtggctgtggtgtctgagcgttctctgtgaagtggccctcgcc
tgtccgctagcaacagtcaactgtaccatgacagcagagatgatctgcaccctggccatt
cagctagaaaaagcctctggttcaacccgaggtccagtctttggctcgatggagatgacc
aacgcacaactgcttcagagggtgcatgatatggtgaagaagggtctcctatctctgtca
aagggtgtctctgctctgattcctcaagatctttctgcagtcacagactccgccttcttt
cagaaactgggcccacttcatccaccctcagcatcagcagaagagataaaaagaatgaat
gaaaataggtggaagaacacagaaggtgaggaaccggaggtggagtttgagccttctacg
aatgtgttcttgctggccagagaccttcatctagagctggaaatcatcctccacagggtc
tctgtcaagctgctgcatcttcactcagttgaaaaacctgagttgatggactggattaag
aacaacaaagtgtccaaagctctttttctgatccagaaggccttgctggagcacgactcc
gagatgatgactgacagcaacacaacaacgaatctcctcgaggaggccttcagcttgatg
gaaaaagcagaacttgaggagaaaaaactttacatgactttgtgccaaactaaacagaag
ccccatcaagagggcaaagcccccaaaccaaaaggagaaagccctccacctgctcctgtc
ctcctttcccgcactgaccacacttttacttttgctcctgctccatatgacttgggagag
caggtgtgctggtaccagctgtttggccgtgtagctgaaggcatcaacaagacggtccgt
ctgaatgactgcattctgccaggaactggacttatggttctggtgggttctggagggtgc
gtgatgagggttgagggtctgcagcccaaccagaagtacgtgtttgctgtagccgcctac
gacagcgagggtaggctgctgggcaacagcataggacagacgaccgtacctctgctggca
tccgtgccagtccagctgctggccacctgggctcacctggctcaggcggctttccaaaca
aaccaatatgctgcagctaagagagcctgcaggaagctttggagccattatatccacccc
agctctaaatccagcagcctgtgggatagacttactgctaccagcctgcataaagcaacc
atccagcagtcttcccctcacctatgcaacctggtcctgacctccatcttcatcgagaca
gaaatcagcatccaggagggggctctccgctgtgaaacccttagcaacagcagcccgttt
gtttgggaccaggacgccagactggcagagtgtgatcggatgctggtggccatagacctg
gctttgtgtctgaatgatgggagctcagctgtgcaggctgtagttacctgttacggcctg
ctggctccgctaatgttccatcaaatcatacatggcaacgtggtgcaggtgctgcagaag
tgtttgctggtcctggaggagaattctggtgtcctcatacactcatggactggagcgacc
acagagtccctcctttacatgacagcttgcatcactttctacctctcaaaagtgctgcgg
ttgctcagaaagcatcaactggctgcagcggttctggaccgcgggcgccggctgcttcag
gaagccactgatgctcggctgcagatgagcaaacattccagtaaagcaaagacgactggg
gcggacggcacagtcagcgattcggtgatgatccggcggcagtttcaagcgctgaacaca
aaacaaagaagaagcaggagcacctgtgaggcagaagtcacctccggtaactgtcctcca
gccccgactgtcccagaggaccccatggttctgtgtgatctgatctacagctgcacctta
caggaggcccatcaggaagtgatgaaaatcaagtggaagacatattttcttgagtttgcg
gctctgttcctccagcggaccctggaggagggtcacccagacctggttctgaagtggggg
gagaacattcttcagtttctcttcaggcgtgatgagatgatgggactatcgtctaaacat
ctggaggctaaaaacagtaaaggcggagctgaaactgacacgcctcagcagaataagatg
tctgttccacatgaagaactgaggaagaagctcaagaaaaagctgccgtgcagcatgatg
aggcatgtcaaaacctacagagagctctgcaccgtggacaacctgctgaccatgatgtca
gatgtggtgcgccgcagcaagaagcgcctccagctgaggaacctgtgctgggaggagagg
ccgtggaggtgtcaggtccaccgctgcatggcccaggcccatctagctgctgctcaccgg
gacatggagactctgcagcacagctacagccagttcgaccctttgtatttctctctggct
ttcactggacttctgatcaagaagcgaccctcatccagacataagtcagaaggcatcccc
tgtccctctgatctgggagaacaggaggagaaaagggaaaagaaagtagttcgatttgat
acctctggggaaagatgtgtggaaggaggacgcttttccccaacagtcgacctgcaaata
gacagaaactctccagtgaattcccttaaacttgccgcttcacatcttcgcagatctatg
gttctggcacatcgaggtggtgactggactctgctgctgtgtgtgtgtcacacggtgtgg
agccacagctgtaaaatcacatcccagcttgaggctcctccccctttcacagaggaccaa
ctgcagcacatcttcactcctctactagtgctagccacagatctagtcatggatatgcta
aacaaactagagctgtggagtttgtatgatcgcgactcgacagaggaagaactagagtcc
agtgtccacttctcagctcctctggacgacggcagtcaggtggacctacgctgggttcgc
tctttagtcctgcacaccctggagcgcctccatagctgtgaaaaatgggaaagtttgtcc
cactttgccttacttttcaactcatacactcgggagcgctacgccctgattgtggctcct
ctgctccttcatgctcagaggagcttgattgaaagaatccgctcagtgggggggccggca
atcccgcagccccaccacgtaaagacacagcagagcacgggcaaagaggtgaccaacagg
agttactttcactgccagctgctcagcggatggagtccttctgagcttcccattgatgaa
gacacgtctcacacaaacgtctttcccagagatggagcttcactcaaagctgcagagaaa
cagcgctccttgtctctcgtgtgcgttcctctggatgtggaagacactctgagcggttac
catcgagccttgcagaaaactccacactgccttcaggttctgcagcatagccgctcctta
ctgctgctgctcctggcaaacacgcagccctacttgacgcagctccagtcagcaggtcgg
gtgagctgtagccccgtggtcaagcccactccaaacatccgtccatgtgagcccagcggg
gaagacttcagcactccagacgccatctttggccttcctgtcagacctgactgcatacca
actgttgttgcttcctattctaattccatcaagtgtctcagagccagtggccacaagtcc
ctcagtcttttggctttgcgtgacatgggaaatttacatttctatgctggaaacgtgcag
gcggctcagagctgctggatccaggctgtggactgcgcccttcagagctcaggtgttgtg
cagaaatgggatggcgtgtcctttggaggaggctccatgccaaaaactgtgaagcacgct
ggtgtttgggggtgtctgcaggccgctgtgatcgcagctaaaatagcacagttcatccta
acgtctgatatcaaccagcgaaccaaatgttgcctgttgtcttctcacctttttaagtgt
gtgctgggctgctccatggctcagccacagcttgatctccagtacgcctcccacaccatc
agagaggagctgctccccggagtcgaccttttctccgaacctcgcaggctccacgtcagc
tccgtcgtctccagcctccactttgtttgtcgctggctcttcatgactggccaccatatt
acgctgctgccccttcttgccctttacctccactttgttggcccggtctgcagagatgta
cggcgcacagttgaaggcaaaattctcaaagttcgtgtcctcactgagctccgtatgttc
agcgaagctgtgatggaggtcatccaactcacacagggagcaggcatcttcctaccgtgt
ggtcctttcatggctaaaacagatctccaaccaatggcgacattctacaacaataaatct
cttctggacaacaaagaggctgtagaaacccttatgaattgtgactttgctcctgagatc
caaacaatgtacggtccatcgctctgcaccagcttcagcctggctcgcgtccagctagtc
ctggccctcagcgagacactaagaggtcttccagatccagatcctaaagattcacatgct
acaatcttagtggagtcggagtccagcgtaaaggaaagagcggacgaagaaccaaaacca
ccgaagcaaaaaacgttcttactttgtcatgaagagagtcagctcacatcagaaagaatt
aagattgtgttactggaagcagcatcctctctgttgacctccaccacagaacagctggca
tcgctgccctgcagtgaggaggagaagctggagctcactgtggagtctagtcttcttaaa
gccaacctccacctgcagcagggacgtcccaaactcagttttgatgctgcagtttcatct
ttagtccttctacaaacatcacctgtgactattggagcatccaactctgaacttacagag
gttttacaggacccagtgatggatactcagcccagagactgtcctggagctgccgaggca
gccgagagaatcggtccgtctctgtggctgcggtgccgcctggctctggtacaaagcctg
gttgccagtatccacacagatgcaactcttctcccaggtaagaacatcaatgaagagacg
gcgcggctgctgcaggagggtattgaggagtgcgttggatggggagaccgtgacactcag
gctttgctgctgatggaatctgctgagctggaagcactgagaggaaagacgcaagagagt
gtagcggtgctgcaggaagcggtggctctgctgtcggagcccgcctgcatgcctccgggc
tccatgctgactttagctcgagccgctttgctgctcaatgacattcaagaacatcagagc
tcctcactcctccaggtcacgaggaagttgttggacatgcagatgcgtctgtttggtcag
agtgtggatgacaaagtgggcgtctgtcctcctggctctgataacatttacctcccttac
atcaccatgctgaaggagatcacgttgaggattgattccatggagaattctgacaacaag
gaccagccgacatcttcagtcgggggtcaaactctccacctaatctga
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integrated database retrieval system
