KEGG   Oryzias melastigma (Indian medaka): 112142811
Entry
112142811         CDS       T07439                                 
Name
(RefSeq) oligoribonuclease, mitochondrial
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112142811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112142811
   03009 Ribosome biogenesis [BR:oml03009]
    112142811
Messenger RNA biogenesis [BR:oml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     112142811
Ribosome biogenesis [BR:oml03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112142811
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-GeneID: 112142811
NCBI-ProteinID: XP_024122155
Ensembl: ENSOMEG00000016878
LinkDB
Position
LG14:complement(14753532..14760342)
AA seq 272 aa
MTACWRGSSRFVFAFLWSGGFRRVSTAPLARGHSRRIRVPLRNQFKQEVCPRHADLSLVS
RLSFVSGRVVMSSSEMSQRMVWVDLEMTGLDIEKDQIIEMACIITDSDLNILAEGPNLII
KQPDQLLDEMSDWCKEHHGKSGLTQAVRESKISLQQAEYEFLSFIRQHTPPGQCPIAGNS
VHADKKFLEKYMPQLMHHFHYRIIDVSTIKELCRRWFPEEYKLVPYKKASHRALDDIQES
IKELKFYRDNIFKAATQERDCTLLENGDDKKP
NT seq 819 nt   +upstreamnt  +downstreamnt
atgacggcgtgttggcgcggttcatcacgttttgtcttcgcttttctttggtctggaggc
tttagaagggtttccactgctccgctcgcacgcgggcattcacgtcgcatcagagtcccc
ctccgtaaccagtttaaacaggaagtttgtccgcggcacgcggacttgagtttggtctcc
aggttaagttttgtttctggcagagtcgtcatgtcgtcctcggagatgtcccaaagaatg
gtgtgggttgacctggagatgactggacttgatattgaaaaggaccaaatcattgaaatg
gcgtgcatcatcacagactctgacctgaacattttggctgaggggcccaacctgatcatt
aagcaacccgatcaactgctggacgagatgtcagattggtgcaaagagcatcatgggaag
tcagggctgacccaggctgtgcgagagagtaaaatctcccttcaacaagcagaatacgag
ttcctgtccttcatccggcagcacaccccacccggacagtgtcccattgctggtaactct
gtgcatgcagacaagaagttcctggagaagtacatgcctcagttaatgcaccactttcac
tacagaataattgatgtgagcaccatcaaggagctctgcagacggtggtttccagaagaa
tacaaactggtgccttataagaaagcctcccacagagctttagacgacatccaggagagc
attaaggagctcaagttctacagagacaacatctttaaggctgcaacccaggagagagac
tgcacattacttgaaaatggagacgacaagaagccctaa

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