Oryzias melastigma (Indian medaka): 112142851
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Entry
112142851 CDS
T07439
Name
(RefSeq) arrestin red cell
KO
K04439
beta-arrestin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04144
Endocytosis
oml04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112142851
04340 Hedgehog signaling pathway
112142851
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112142851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142851
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
GPCR adaptor proteins
112142851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arrestin_N
Arrestin_C
VPS28
Motif
Other DBs
NCBI-GeneID:
112142851
NCBI-ProteinID:
XP_024122232
Ensembl:
ENSOMEG00000013788
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All DBs
Position
LG14:415285..439162
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AA seq
406 aa
AA seq
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MGDKAGTRVFKKSSPNCKLTVYLGKRDFVDHLDHVDPVDGVILVDPEYLKDRKVFVTLTC
AFRYGREDLDVLGLSFRKDLYISTFQAFPPVPEERKPNSRLQERLLKKLGQHAHPFYFTI
PQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSIEEKIHKRNSVRLVIRKVQYAPEKPG
PQPMVETTRSFLMSDRSLHLEASLDKELYYHGEPISVNVHVTNNSTKTVKRVKISVRQYA
DICLFSTAQYKCPVAQLEADDQVSSSSTFCKVYTLTPTLDKNREKRGLALDGKLKHEDTN
LASSTIVKDVTNKEVLGILVSYRVKVKLVVSRGGDVSVELPFILMHPKPVEPPASRPQSA
VPEMDPPIDTNLIEFDTNVSQDDDFVFEDFARLRLKGVVDDKDEDC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaaggcgggcaccagagtcttcaagaagtccagccccaactgcaagctcaca
gtttacctgggaaagagggactttgtggaccacctggaccacgtggatccagtggacggt
gtgatccttgtggacccagagtacctaaaggacaggaaagtcttcgtcactctgacctgt
gcgttccgatacggccgtgaggatttggacgtgctgggcctgtccttccggaaggatctg
tatatctccactttccaggcgttccccccagtgcctgaggagcgtaaacccaacagccgt
ctgcaggagcggctgctgaagaagctgggccagcatgctcaccccttctacttcacaatc
ccccagaacctcccgtgttctgtcaccctgcagccgggtcctgaggacaccgggaaggcc
tgcggagtggactttgagatcagagcattctgtgccaagtccatagaagagaagatccac
aagaggaactcggtgcgtttggtgatcaggaaggtccagtacgctccagagaagcccggc
ccacagcccatggtggagacgacccgcagcttcctgatgtcagacagatccctgcacctg
gaggcctcgctggacaaagagctgtactaccatggagagcccatcagcgtcaatgttcac
gtcaccaacaactccaccaagaccgtcaagagagtgaagatctcagtgcgtcagtacgca
gacatctgcctgttcagcaccgctcagtacaaatgtccagtggcccagctagaggctgac
gaccaggtgtcgtcgagctccaccttctgtaaggtgtacactctgacccctacactggac
aagaaccgcgagaagaggggcctggctctggacggcaagctgaagcacgaagacaccaac
ctggcctcatccactattgtgaaggacgtcaccaacaaggaggtgctgggcatcctggtg
tcctacagagttaaggtcaagctggtggtttcacgcggaggcgatgtatcggtggagctg
cccttcatcctcatgcaccccaaacctgtggaaccgccagcgtcccggcctcagtccgcg
gtgccagagatggacccccccatcgacaccaacttgatagagtttgacacaaacgtctcc
caggacgacgacttcgtcttcgaagactttgcccgcctccggctcaaaggcgtcgtggac
gacaaagatgaggactgctag
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