Oryzias melastigma (Indian medaka): 112142928
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Entry
112142928 CDS
T07439
Name
(RefSeq) LIM domain kinase 1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112142928
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112142928
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112142928
Protein kinases [BR:
oml01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
112142928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RIO1
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
112142928
NCBI-ProteinID:
XP_024122373
Ensembl:
ENSOMEG00000009076
LinkDB
All DBs
Position
LG14:19114199..19123002
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AA seq
774 aa
AA seq
DB search
MSRRDQRFRKGVKGRCCECDCILSHWYYEREGQLFCKKHYWSRFGEHCHGCKETILTGLI
MVAGEQKYHPECFTCIKCEMVIGDGDTYTLIERSKLYCGHCFSQGVVTDGRAISSLTKRP
HMVALVTLPPRAACRKGLTFTVDFNQDPGPLVTVTQLDPTVLSPDLLSSVQEGDRVLEVN
GIPIQNVSPDEINRVIQDTSRPLQLTIEHNPQPSHDDLQPDISADSISSPSPHIQDKLSS
KLPSLEEEPTHHEEAEGQKTNLSPPQQQGATGMRSRLILRSCSIDKCPLSPRALSLISQR
KDMVRSESLRVDPGERTHRIFRPSDLIHGEVLGKGCFGQAVKVTHQETGEVMVMKELIRF
DEETQRTFLKEVKVMRCLDHPNVLKFIGLFYKDKRIHFVSEYIQGGTLREAITKMDQDFS
WTVRVGYAKDIAAGMAYLHSMNVIHRDLNSYNCLVRENHSVVVADFGLARLVMEEKNQSK
TSSLERPAKGNLSELRRPDRRKRYTVVGNPYWMAPEMIHGKSYDERVDIFSFGIMTCEII
GLVSADPDFLPRTNDFGLNVPSFLQQYYPPECPSAFLPLAALCCDLDADKRPSFSKLEEY
LDNVVMHLNIGLPLLSELEQLCRAFWKNYDQQCLSPNQDKTKHQKLCSQADKQTNSAKHC
TENPNNHTEPYHSTPSPNPNTLESHLNGNLERRRDLNNVRTGSKDTNLLFLKITDKNESD
TCETTSDSTGKPESQPDSSEAQQVKGHALVGRSSRPRRVCRVLWDKPPEDTPVP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgacgggaccagagatttcggaaaggagttaaagggcggtgctgtgagtgtgac
tgtatcctgtctcactggtactatgagagggagggtcagctcttctgcaagaaacactac
tggtctcgctttggagaacactgccacggctgcaaggagaccatcctaacaggacttatc
atggttgctggagaacaaaagtaccaccctgagtgcttcacctgcataaagtgtgaaatg
gtcattggagatggagacacgtacacgcttattgaacgctccaaactgtactgcggccac
tgcttcagtcagggtgtggtaacagatgggagggcaatttcttcgcttaccaagaggcct
cacatggtggcgctggtcacgctgcctccccgagcagcttgcagaaaaggcctgactttt
acagttgactttaatcaagacccaggacctctcgtcacagtaacacagttagacccaaca
gtcctcagtcctgacctgctgtcttctgtccaagagggcgacagagtcctggaagtcaac
ggcattcccatccagaatgtctccccagatgagataaaccgagtgattcaagacacgagc
agacctctgcagctgaccattgagcataacccacaaccttctcacgacgaccttcaacca
gacatttctgctgatagcattagctcgccttcaccccatatccaagacaagctttcctcg
aagcttcccagtctggaggaggaaccaactcatcatgaagaggcagagggacagaagaca
aacctctcaccacctcagcaacaaggagccacagggatgcgatccagactcattctccgc
agctgcagtatcgacaagtgtccactgtcccccagagctctgtccctcatatcccaacgg
aaggacatggttcgctctgagtctctcagagtggaccctggagaacggacgcatcgcatc
tttagaccgtcagacctgatccacggagaagtgttgggcaaaggctgctttggacaagct
gttaaggtaacacaccaagaaacaggagaggtgatggtgatgaaggagttgatacgcttc
gatgaagagactcagaggacattcctgaaggaggtgaaggtgatgcggtgtctcgatcat
cccaatgtcctcaagtttattggactgttttataaagacaagcgcatacattttgtctct
gaatatattcaagggggaacactccgagaagcaatcacaaaaatggaccaggacttctcc
tggactgttagagtcggttatgccaaagatattgcagcaggaatggcatatctgcactcc
atgaatgtcatccaccgagatctgaactcttacaactgtctggtcagagagaatcactca
gtggtggtagcagactttggacttgccaggttggtgatggaggagaaaaatcagagcaag
acgtcctctctagaacgacctgcaaaggggaacctatcagagctgcggagaccagaccgc
cgaaaacgatatacagtggtgggaaacccttactggatggcgccggagatgatccacggg
aaaagctacgatgaacgagtggacatattttcttttggaatcatgacatgtgagattatt
ggtctagtcagcgctgatcctgatttccttcctcgaacgaatgactttggactcaacgtc
ccaagtttcctgcagcagtattaccctcccgagtgcccctctgccttcctgcctctggct
gctctctgctgcgacttggatgctgataaacgtccctcgttttcaaagctggaggagtac
ctggacaacgtagtgatgcacctgaacatcggtctgcctttgctctctgagttggagcag
ctctgtagagccttctggaagaattacgaccagcaatgcctctctccaaaccaggacaag
accaaacatcagaagctttgctcgcaggcggacaaacaaaccaacagtgccaaacattgc
acagaaaatccaaacaatcacacagagccttatcattcaactccaagtccaaatccaaat
acacttgaaagtcatttaaatgggaatttggagcgacgccgtgatctcaacaatgtgagg
actggatcgaaggacacaaatctcttattcctaaagatcacagacaaaaatgagagtgac
acctgtgagacgacgagtgactccacaggtaaaccagaatcccagccggattcctctgag
gctcagcaggtcaaaggtcacgcccttgtaggtcggtcaagcaggcccagaagggtgtgc
agagttctgtgggacaaaccccccgaagacaccccggtgccctga
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