Oryzias melastigma (Indian medaka): 112142957
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Entry
112142957 CDS
T07439
Symbol
bnip1b
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112142957 (bnip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142957 (bnip1b)
Membrane trafficking [BR:
oml04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
112142957 (bnip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
Muted
Motif
Other DBs
NCBI-GeneID:
112142957
NCBI-ProteinID:
XP_024122422
Ensembl:
ENSOMEG00000007608
LinkDB
All DBs
Position
LG14:19398951..19402000
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AA seq
230 aa
AA seq
DB search
MASSADVHVRICAQEIIKYDLEIKALIQDIRDCPGPQSSLMELNSQIKEKFSKLRLRIQD
LEQMAKEQDRETDRLAIQAETESQRRQLMSNQTAWRKANLACKLAIDNMEKDELLHAGEN
QNTRQRKVTKERLVETSSNITESLMSISRMMAEQVKQSEDTIGSLATSSRTVQETNEEFK
SMTGTIHLGRKLILKYNRRELTDKLLIFLALALFFATVLYILKKRLFPFI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcggcggatgttcacgtccgaatttgcgcccaagaaatcataaaatatgat
ttggaaataaaagctctcattcaggacatcagagattgtcctggacctcagtcttcactc
atggagctcaactctcaaatcaaagagaaattcagtaagctgaggctcaggatacaggat
ctggagcagatggctaaagagcaagacagagagacagacagactagctattcaagcagag
acagagagccagcgacgacaattgatgagtaatcagactgcgtggagaaaagccaatttg
gcttgtaaacttgccatagacaacatggagaaagatgagctgctgcatgctggagaaaac
cagaacaccaggcaaagaaaagtaactaaagaaaggttggtggaaacgagcagcaacatt
acagagagtctgatgtccatcagcagaatgatggctgaacaggtgaagcagagtgaagac
accattggcagccttgccacctcttcaagaacggttcaggaaaccaacgaggaatttaaa
agcatgacgggaaccatccatctgggcaggaagctgatcctgaagtacaaccgacgcgag
ctgacagacaagctactgatttttctcgcgctggctctgttcttcgccactgttctctac
atcctcaagaagcgccttttccccttcatttaa
DBGET
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