Oryzias melastigma (Indian medaka): 112142968
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Entry
112142968 CDS
T07439
Name
(RefSeq) proto-oncogene DBL isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142968
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112142968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
PH
Spectrin
SH3_1
Spectrin_6
DUF6834_C
Motif
Other DBs
NCBI-GeneID:
112142968
NCBI-ProteinID:
XP_024122447
Ensembl:
ENSOMEG00000006840
LinkDB
All DBs
Position
LG14:complement(19768630..19796243)
Genome browser
AA seq
1015 aa
AA seq
DB search
MAESNPLRGFPRLRRAATSFPGNLHLILVLRPSSLLSPAPSPSSSTDLGFRFSQDDFLLK
MPVVMLRSVGDLLRYIDENHLASDFTAKVEYCQSDWLILRSSIETFAVTVKEIAQLLQSF
GSEISDTELPDEANAIEFLLHSHTHRYKQMKDDIRGVLKEGRLLFSNLETVKAAKKEIEE
EKEIQSDMETVRRLLAQLRDMEEAFDGFFEKHHLKLQQYLQLLHYEISFQQMEEVLERLS
AQEKEIASVGTTVVQTEQLLKDLEMLDKHAQEEMARAQVVILHGHQLAANHHYALALIVQ
RCNELRHLCDVITAAVRTKRASLTRTRDLLLRLEEALRWCDEGAYLLASQMVDRFQTKEG
AQEALQYLSCHQERAPSAVKNCQDSLSFDFEAVLTPQLESQITMVTEKLNSVQAMIRNRE
QCLRKLADVQVRPIQLVAPRPEPDQTVLRCKSPLFSPKHGVDFSVLNSKFSFDLLPGKRA
TKKNNSQRKIEVMHDYQGNRSSLYGPIPETDSETEDNPEQVTRHIMKELISTERIYVDEL
LSVLLGYRAEMEDPSMSNLLPSALRSQKDVLFGNMPEIYQFHSRIFLQDLQDCLETPERV
GSCFLQRKDNFQVYERYCQNKPRSELLWRQCSDSPFFQECQKKLDQKLGLDSYLLKPIQR
LTKYQLLLKELLKQCTEQRYRSELQEALNSMLELLKSVNDSMHQIAITGYQGELSQLGRV
VMQGSFTVWISYKRAAVRMKELARFKPMQRHLFLYEHALLFCKRRDEDNHDRTPFYSFKS
CLRMNAVGITETVKGDVKKFEIWYSGREVVYVVQAPTVEVKVSWLTEIRKILTNQQKMHQ
DESPCLSLSDNPLSDSASEVCVSWDGPSVGGCSACLPVPHSSSTTSHSHRFREEESTFSS
PTHSEPVVRSPRRSWPVTAHSVAICEGLEDWGSTDLSALSDSEEEDQPAPLVAGRYRVMV
ESSMASSDDISFECGDVIQLLHEDSSGMWMVKNISRGEEGRVLPEDLHRILGETF
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtccaacccgctgcgggggttcccccgtctgcgccgggccgcgacttctttt
ccgggtaacctgcatctgatcttggtgctccgccccagtagcttgttaagccccgccccc
agcccgtcttccagcactgacctgggctttcgcttcagccaggatgacttcctgttaaag
atgccggtggtgatgctgcgctcagtcggagacttgctgcgctacatcgatgaaaaccac
ctggcgtcagacttcacagctaaagtggaatactgccagagcgactggctcatccttcgc
tcgtctattgagacctttgctgtgacggtgaaggagatcgcacagctgctgcagagcttc
ggatccgagatttctgacaccgaacttccagatgaagctaacgccatcgagttcctcctc
cattcccacactcacagatacaaacagatgaaggatgacatccggggcgtgctgaaagaa
ggccgccttctgttttccaacctggagaccgttaaagcagctaaaaaagaaatagaggag
gagaaggaaatacagtcagacatggagactgtgaggaggctcctggctcagctcagagac
atggaggaagcatttgacggcttctttgaaaagcaccacctgaagctgcagcagtacctc
cagctgcttcactatgaaatcagcttccagcagatggaggaggtgctggagcgactctct
gcccaggagaaggagatcgcttctgtggggaccacagtggttcagacagagcagcttctg
aaagatctggagatgctggacaagcatgctcaggaggagatggctcgggcccaggtggtt
atacttcacggccaccagttggcagccaaccaccactacgccctggcgctcatcgtccag
cgctgcaatgagctgcgacacctctgtgatgtcatcaccgcagccgtccggaccaagcgg
gcttcgctcacccgaacacgggacctgctgctgcgtctggaggaggcccttcgttggtgc
gacgagggcgcctatttgctggcgagtcaaatggtggacaggttccaaaccaaagaagga
gctcaggaggcactgcagtacctaagctgtcaccaggagagggcgccatctgctgtgaaa
aactgccaggactccctgagttttgattttgaggctgtcctcaccccacagctggagtcc
cagatcaccatggttacagagaagctaaactcagtccaggctatgatcagaaacagagag
cagtgtttgagaaaactggcagatgtgcaggttcgacccatccagctggtggctccacgg
ccagaaccggaccagactgtactacgttgtaaatctcccctcttttcccctaaacacggg
gttgatttcagcgtcctcaactcaaagttttcctttgacctgcttcctggtaaaagagcc
acaaagaaaaacaacagccaacgcaagattgaggtgatgcacgactaccaaggcaaccgc
agcagtctttatggtcccatccccgagacggattcagaaacagaggacaatccggagcag
gtcacgcgtcacattatgaaagaactgatatccacagagaggatctatgttgatgagctg
ctctctgtccttctgggctacagggcagaaatggaggacccctccatgtccaatctcctg
ccttcagctctacgcagccagaaagacgttctgttcggcaacatgccagagatttaccag
ttccacagcaggatctttcttcaagatctgcaggattgcctggagacaccagagagagtg
ggctcatgtttcctgcagcggaaagacaatttccaagtgtatgaacgctactgccaaaac
aaacctcgctctgagctgctgtggagacagtgctctgattcgcccttttttcaggaatgc
cagaagaagctggaccagaagctgggtcttgattcttaccttctcaaaccgatccaacgc
ctcaccaaataccagctgcttctcaaggagcttctgaagcagtgcacagagcagcggtac
cgcagcgagctgcaggaggctctgaactccatgctggagctgctcaagtctgtcaatgac
tccatgcaccagatagccatcaccggatatcagggggagctcagccagctgggccgtgtg
gtgatgcaggggagcttcactgtgtggatcagctacaaacgggcggcggtgcgaatgaag
gagctggccaggttcaaacccatgcagcgacacctcttcctctatgagcacgccctcctc
ttctgcaagcgcagggacgaggacaaccacgacaggacacccttctacagcttcaaatcc
tgcctcagaatgaatgcagttggaatcacagaaaccgtgaaaggagatgtgaagaaattt
gaaatttggtacagcggcagagaggtggtgtatgtagttcaggcgcccactgttgaggtc
aaagtttcttggctcacagagattcgaaaaattctcaccaaccagcagaaaatgcatcaa
gatgagtctccctgtctttctctttcagacaatcctctctctgacagtgcatcagaggtg
tgtgtttcatgggacggcccgtcggtgggaggctgctcagcgtgtctccctgttcctcac
agctcctctaccacaagtcactctcacaggtttagagaggaggagtcgacgttctcaagc
cccacccattccgagcccgtggtccgttcaccgcgacgtagctggcctgtcaccgctcac
tcagtggcgatctgtgagggcctggaggactggggctctacagacctctctgccctatca
gactcagaggaagaggatcagcctgccccactagtggctggaaggtacagagtgatggtg
gagagcagcatggccagctctgatgacatcagcttcgaatgtggggatgtcatccaactc
ctgcatgaggactcgtcgggaatgtggatggtgaagaatatcagtcgaggtgaagagggt
cgtgttctccctgaagatttgcacaggattctgggagagacgttttga
DBGET
integrated database retrieval system
