Oryzias melastigma (Indian medaka): 112142974
Help
Entry
112142974 CDS
T07439
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5
KO
K08518
syntaxin-binding protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112142974 (stxbp5b)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112142974 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
112142974 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40
Beta-prop_HPS5
WD40_Prp19
Lgl_C
Beta-prop_IFT140_1st
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
112142974
NCBI-ProteinID:
XP_024122461
LinkDB
All DBs
Position
LG22:complement(204012..216419)
Genome browser
AA seq
1101 aa
AA seq
DB search
TQTGALRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDTVHLWNLRQKIPAIL
HSLKFNRERITYCHLPFQSKWLYVGSERGNIHIVNVESFSLSGYVIMWNKAIELSTKTHP
GPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADYRYSYDEAIHSIAWHHEGKQFICS
HSDGTLTTWNIRTPAKPVHTVTPHGKQPKDGKKPEPCRPILKVEYKTTRAGDPFMVLSGG
LSYDTVGRRACLTVMHGKSTAVLEMDFPIVDFLTLCETPYPNDFQEPYAVVVLLQKDLVV
IDLGQIGYPVFESPYPLNIHESPVTCCEYYADCPSDLIPALYSVGNRQKRQGYSKKEWPI
SGGNWGQGAQSYPEIIVTGHADGSIKFWDASALMLQVLYKLKTAKVFERPRCKEEKAGGA
EAGMDEDPFAVQTFFWCPESRMLCVGGVSAHLVVYRFSKQEVSAEVVQLLEVRMQSETSS
VDSPDPGDQTPPGTTSSPQEGDAPPPAVCGSSEGPRDSPPCLQVRSPPLKQSAGYQVELV
IQLVWVSGEPPQQITSLALNSSYGLVAFGNSTGLAVVDYLQKTLVLSMSMSELYNPAEPL
LHSPRKSQHPSGALCDSNDGTNHLDDRCKSPTSGSASPCNSDEERKQKFIEKVKFKSRRF
SKTVANDFAKISRRISSSNEQKPEHERRSGLRLACRRSCASSKAKPPQMRLKDELCRSQS
DPTPYARDGSSSRSRSSSVTSIDRESAEVLSALLFAETLPRRSDGGLSPCLMVGASQGSV
VMLSLTLPPAGEQRLLQPVSLTCCGSLTRLRGGVLTMALLDSTGALLPPPYEPWCDPNAS
DEEKARRRRPASPPPPSEGQDAQYAVLCSEKQAKVVSMATQSGVHKHSITEASFVLRADV
VHVAGAYCIACFCANGHIMALSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQALYLTSP
TEIQRISYIQETCDNLQEMLSELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGEVAA
GKASRSLAQHIPGPGGMEGMKGAASGVVGDLARARIALDERGQKLGELEERTAAMMSSAD
SFSKHAHDMMLKYKDKKWYQL
NT seq
3308 nt
NT seq
+upstream
nt +downstream
nt
ggactcagaccggagcgctgaggctctttggccgcgccggcgtggagtgttactgtcagc
acgagagtggggcggcggtcatccagctgcagttcctcgtcaacgagggggcgctggtga
gcgctttagctgacgacaccgttcacctgtggaacctgaggcaaaagattcccgccatcc
tgcactccttgaagttcaacagggagaggatcacctactgccacctgcccttccagagca
agtggctgtacgtggggtcagagcggggcaacatccacatcgtcaacgtggagtccttct
cgctgtcgggatacgtcatcatgtggaacaaagccatcgaactatccacaaagacccacc
caggaccggtggttcacatcagcgataaccccatggatgaggggaagctcctgatcgggt
tcgagtgtggggtcgtggttctgtgggacctgaagtccaaaaaggccgactaccgctaca
gttatgatgaggccatccactccatcgcctggcaccatgaggggaagcagttcatctgca
gccactccgacggcacgctgaccacgtggaatatccggaccccggccaagccggtccaca
ccgtcacgccacacgggaagcagccgaaggacgggaagaagccggagccctgcaggccca
tcctgaaggtggagtacaagaccaccagggcgggggaccccttcatggtcctgtctgggg
ggctgtcctacgacacggtggggaggagagcctgtctgaccgtcatgcacgggaagagca
ccgccgtgctggagatggacttccccatcgtggatttcctgacgctctgcgagactccgt
acccgaacgacttccaggagccgtacgccgtggtggtcctcctgcagaaggatctggtgg
tgatcgacctcggacagatcgggtaccccgtgttcgagagcccgtaccccctgaacatcc
acgagtccccggtgacctgctgcgagtactacgccgactgcccgagcgacctcattccag
cgctctactctgtaggcaaccgccagaagagacaaggctacagcaagaaggagtggccca
tcagtggggggaactgggggcagggcgctcagagttaccccgagatcatcgtcactggac
acgccgacggctccatcaagttctgggacgcttctgcattgatgctgcaggtgctctaca
agctgaagactgccaaagtgttcgagcgtcctcgctgtaaggaggagaaggccggcggcg
ccgaggccggcatggacgaggacccgtttgccgtgcagaccttcttctggtgtcccgaga
gccggatgctctgcgtggggggggtgtcggcccacctggtcgtctacaggttcagcaaac
aggaagtgagcgccgaggtggtccagctgctggaggtgcgtatgcagagtgagacgagca
gcgtggactctcctgatcccggagatcagaccccccccgggacgacctccagcccacagg
aaggcgacgccccgcccccggcggtctgtggctcctctgaaggacctcgggacagccccc
cgtgtctgcaggtccggagcccccccctgaagcagtcggcggggtaccaggtggagctgg
tgatccagctggtgtgggtgagcggggagcccccccagcagatcaccagcctggccctca
actcctcctacggcctggtggcgttcgggaacagcaccggtctggcggtggtggactact
tgcagaagactctggttctcagcatgagcatgtcggagctgtacaaccccgccgagccac
tgctgcactcgccacggaagtcccagcatccctctggagcactgtgcgactccaacgacg
ggacaaaccacctggacgatcgctgcaagtcccccacctcaggctccgcctccccctgca
actcagacgaggagcggaagcagaagttcatagagaaggtgaagttcaaaagcagacgct
tttccaagacggttgccaatgactttgccaagatttcacggagaattagctcatccaatg
agcaaaagccggagcatgagcgcaggtccggactccggctggcctgcaggaggagctgcg
cctcctccaaagccaagcccccccagatgaggctgaaggacgagctgtgtcgaagccagt
ctgaccccaccccctacgccagggacggctcgtccagccgctcccgcagctccagcgtga
ccagcatcgaccgcgagtctgcagaggtcctctccgccctcctcttcgccgagaccctcc
ccaggaggtcggatggggggctcagcccctgcctgatggtgggggcctcccagggctctg
tggtgatgctgtctctgacgctgccccccgctggagagcagaggctgctgcagcccgtca
gcctcacctgctgcggcagcctgaccagactgagggggggcgtcctgaccatggctctgc
tggactccaccggggctctgctgccccccccctacgaaccgtggtgcgaccccaacgcct
cggacgaggagaaggcgcggcggcgcaggccagcctccccaccgccgccgtcggagggcc
aggacgcgcagtacgccgtgctctgctcggagaaacaggccaaggtggtttccatggcga
cgcagagcggcgtccacaaacacagcatcaccgaggcctccttcgtgctcagggccgacg
tggtgcacgtggccggggcgtactgcatcgcctgcttctgcgccaacgggcacatcatgg
ccctcagtctgcccagcctgcggccgctgctggacgtcaactacctgccgctgacggaca
tgcggatcgccagaaccttctgcttctccaaccagggccaggcgctgtacctcacctccc
ccacggagatccagaggatctcctacatccaggagacctgcgacaacctgcaggagatgc
tcagtgagctgttcacccccgtggagacgcctgaagctccaaacagaggtttcttcaaag
gcctttttgggggcggagctcagtctttggacagggaggacctcttcggtgaagtggctg
ctgggaaagcgtcccggagcctggcccagcacatccccggcccgggaggcatggagggca
tgaagggcgcggcgtcgggcgtggtgggcgacctggcccgggccagaatcgccctggacg
agcgagggcagaagctgggcgagctggaggagagaacggcggccatgatgtccagcgccg
attccttctccaaacacgcccacgacatgatgctgaagtacaaagacaagaagtggtacc
agctctga
DBGET
integrated database retrieval system
