KEGG   Oryzias melastigma (Indian medaka): 112143099
Entry
112143099         CDS       T07439                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    112143099 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112143099 (taf12)
   03036 Chromosome and associated proteins [BR:oml03036]
    112143099 (taf12)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     112143099 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     112143099 (taf12)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     112143099 (taf12)
    STAGA complex
     112143099 (taf12)
    TFTC complex
     112143099 (taf12)
    SAGA complex
     112143099 (taf12)
    SLIK complex
     112143099 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Tic110
Other DBs
NCBI-GeneID: 112143099
NCBI-ProteinID: XP_024122607
Ensembl: ENSOMEG00000017950
LinkDB
Position
LG16:complement(3956518..3959475)
AA seq 131 aa
MANSSPIIVKSLPAGPAGRSSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADD
FIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPYKKACTTEAHKQ
RMALIRKTTKK
NT seq 396 nt   +upstreamnt  +downstreamnt
atggcgaacagctccccgataatagtgaagagcctgcctgcgggtcctgctggtagaagc
agtccagaaggatctcaggtcctctctaagaaaaagctgcaggacctggtgagagaaatc
gacccaaatgagcaactggatgaagatgttgaagagatgcttcttcaaatcgcagatgac
ttcatagaaagcgtcgtgacggcagcctgtcagctggcacgccatcgcaaatcaaacaca
ttggaggttaaagacgttcagttacatctagagcgtcagtggaacatgtggatccctggg
tacggctcagatgaaattcgaccatataagaaggcttgcaccacagaagctcacaaacag
agaatggcactgatccgcaagacgaccaaaaaataa

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