KEGG   Oryzias melastigma (Indian medaka): 112143100
Entry
112143100         CDS       T07439                                 
Name
(RefSeq) ribonuclease ZC3H12A isoform X1
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112143100
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     112143100
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 112143100
NCBI-ProteinID: XP_024122608
Ensembl: ENSOMEG00000000483
LinkDB
Position
LG16:3541598..3548382
AA seq 623 aa
MKTKSKTEQTSKNYPSEAVLSPVLMDQTLPTRRSPSEQPEADSEELQLKVDFFRKLGYST
AAVKTALRKQGLNTDTNAVLGELVRTSTGSAPCVSEGGNKSSKDPLPPPAGTMSSQQGDQ
KRADTELRPIIIDGSNVAMSHGNKEVFSCRGIQLAVNFFLDRGHSEITVFVPSWRKEQPR
SDTPITGQHILTELEKQKIVVFTPSRRVGGKRVVCYDDRFIVKEACDSGGVIVSNDTYRD
LQGERPEWKKCIEERLLMYSFVNDKFMPPDDPLGRHGPSLSNFLRVKPLPVEQKRQLCPY
DKKCTYGLKCKFYHPERANQSYLSLADELRERAQISAVTEDRSARLSPRQPQNDSPHPQD
KHLPRERQSASLPGLVSENKLLYWENPKKHPNHIGSSPAGGQYQKEWPSLHLAQNSYYGT
MPHECLDSGFDSFDSYSSDVSHSHSGNHQMRPHCQNAFSGPAFLEHTKTSQSCRCCSHTQ
QQNRNMDYKGQPFNKTYSPNMFPSNMPQQHSLPSHLNYNGTPHLPHSYWSDPFQGMPVIR
AVSSLPSEVHSSHSHSSSHQYQPWGQQPPSTSFDPERSELCKKLQAIFNPKQVDEVMTMF
PNLTDPEKLAAKILNLKAQRQIF
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgaagacaaagagcaaaacagagcagacctcaaaaaactatccttctgaagcagtttta
tcacctgtcttgatggaccaaacacttcccactcgaagatcaccttcagaacaaccagaa
gctgacagcgaggagctccagctcaaagtggacttcttcaggaagctgggttattccacc
gcagcagtgaagactgctttgagaaagcagggcctgaacacggacacaaacgccgttcta
ggggagctggtcaggaccagtaccggctctgcgccctgtgtttctgagggcggcaacaag
agctccaaagaccctctaccacctccagcggggaccatgtcatcgcagcaaggagaccaa
aagagagccgacacagaactgaggccgatcatcatagacggcagcaatgttgccatgagt
catggaaacaaggaagtgttctcatgccggggcattcagttagcggtgaacttcttcctg
gaccgaggtcacagtgagattacagtgtttgttccctcctggcgtaaagagcagcccaga
agtgatactcccataacaggacagcacatcctgacagagcttgaaaaacaaaagattgtg
gtcttcacgccatcccggcgcgttgggggcaaacgcgtggtctgctatgatgaccgtttc
attgtcaaggaggcgtgcgattctggcggagtgatcgtgtccaacgatacctaccgtgat
ctccaaggagaaagacctgagtggaagaaatgcatcgaagagaggctcctcatgtactca
tttgtaaatgacaaatttatgccaccagatgatcctctgggtcgacatgggcccagcctc
agcaacttccttagagtaaagccactcccagtggagcagaaacgacaactatgtccatat
gacaaaaagtgcacgtatggcctcaaatgtaagttctaccatcccgagagggcgaaccag
tcctatctgtcgctggctgacgaactgagagagagagcccagatttctgctgtgacagag
gatagatctgcgagattatccccgagacagcctcagaatgactctccccaccctcaggac
aaacacctccccagagagcggcagagtgcctcacttccaggtctggttagtgaaaacaaa
ctgctttattgggagaatccaaaaaagcatccaaaccatattgggtcttcccccgctggg
ggccagtaccagaaagagtggccttcgttacacttggctcagaactcctactacggtacc
atgcctcacgagtgtttggattctggtttcgactcttttgacagttacagctcagatgtt
tcacattctcacagcggcaatcaccaaatgagaccccactgtcaaaacgccttttcagga
ccggcttttttagaacacactaagaccagccagtcctgcaggtgctgttctcacacccag
caacaaaacagaaacatggactacaagggtcaaccctttaataagacctactctccaaat
atgttcccaagcaacatgcctcaacagcacagcctccccagccacttaaactacaatggg
acgccccacctgccgcatagctactggtcagatcccttccagggcatgcccgtcatcaga
gcggtgagcagcctcccttcagaggtccattcctcacattcccatagttcctcccatcag
taccaaccctggggacaacaaccaccttccacctcgtttgacccagagaggtccgaactt
tgcaaaaaactgcaagccatcttcaacccgaagcaagtggatgaggtcatgacgatgttc
ccgaatctgactgatccagaaaaactggctgcaaagatacttaaccttaaagctcaaagg
cagattttctaa

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