Oryzias melastigma (Indian medaka): 112143132
Help
Entry
112143132 CDS
T07439
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112143132 (irx1a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112143132 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112143132
NCBI-ProteinID:
XP_024122652
Ensembl:
ENSOMEG00000013869
LinkDB
All DBs
Position
LG16:complement(14185408..14189692)
Genome browser
AA seq
498 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSDRAGVLTPSSRGGSTDIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDENDGDQSNDDEDDKSTEG
SRELRGGVGVPGELDSLEKRRAFALQAHEAFEKSKISAHAGAKDASDANNTRVLSPDRPG
RFPLPSSNKPKIWSLAETATSPDSSSQKPTSPCGPGAPTHPSAPHHQIQTHPAFLPSHGL
YTCQIGKFHNWTNGGFLGQNSLLNVRSFLGVNQHHHHHHNHHLAVQQQQQQQPQQQQPTS
VVVSPVAASAAVGNDSKAPTENHSPNHIERENGVRSDSPPTQTLKSSFRPILDRSSLPSS
ARSPQDATQRVLTALSSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctaggctacccgcagtatttaagtgcttcccaggcggtttacggg
agcgacagagccggagtgctcacgccgtcgtcccggggagggagcacggacatcggaggg
agtccatccgccaccgccgcagccgtcacgtcggtgctgggcatgtacgccaacccgtac
gcgcacaactacagcgctttcttgccttacaccagcgcagacctggctctgttctcccaa
atggggtcccagtatgagctgaaggacagtcccggcgtgcaccctgccagcttcgcagcc
cacacatctcctgccttctacccctacggtcagttccagtacggagaccccgccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaacgagcacaggaag
aacccgtacccgaccaagggggagaaaatcatgctggccatcatcaccaaaatgacgctg
acgcaggtctccacttggttcgccaacgccaggaggaggctgaagaaggagaacaaggtg
acttggggcagcaggagcaaagaggacggggaggacggcaatttattcggaagcggggac
gaggcggagaagaatgaagacgaggaggagatcgatctggagagcatcgatatagacaaa
atcgacgagaacgacggggatcagagcaatgacgacgaggacgataaatccacggagggg
agcagggagctcaggggcggcgtgggggtgcctggggagttagacagcctggagaaaagg
cgggccttcgccctgcaggcccacgaggcctttgagaaatccaagatttcggcgcacgcg
ggcgccaaggacgcatcagacgccaacaacaccagggttttgtctccggacagaccgggt
cgcttccccctcccctcctccaataagcccaaaatatggtccttagcggagacggccacc
agccccgacagctcctctcagaagcccacgtccccctgtgggccgggagcccccactcac
ccgtcagcgccccaccaccagatccagacgcacccggccttccttcccagccacggactg
tacacatgtcagattggaaagttccacaattggacaaacggggggttcctgggccagaac
tccctgctgaatgtgaggtcgtttcttggagtgaatcagcaccatcaccaccaccacaac
caccacttggcagtccaacagcagcagcagcagcagccgcagcagcagcagccgacatca
gtggtggtgtcaccggtagcagcttctgcagcagtcggcaacgacagcaaggccccaaca
gaaaaccacagtcccaatcacatagagcgtgaaaacggcgtaagatctgattcgcctcca
acacagacgctgaagtcttcctttcgacccattcttgacagatcctctctgccttccagc
gccaggagtccacaagacgccacacaacgggtcctcactgcgctctcctcggcttga
DBGET
integrated database retrieval system
