Oryzias melastigma (Indian medaka): 112143164
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Entry
112143164 CDS
T07439
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112143164
03036 Chromosome and associated proteins [BR:
oml03036
]
112143164
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112143164
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112143164
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112143164
microRNA pathway
RISC loading complex
112143164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112143164
NCBI-ProteinID:
XP_024122701
Ensembl:
ENSOMEG00000020588
LinkDB
All DBs
Position
LG16:complement(1691669..1720304)
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AA seq
867 aa
AA seq
DB search
MEIGTSGAVGPQALFSMPQRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKKSLYTANPLPVAPTGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFRVRDEMAHVTGRVLPAPMLQ
YGGRVSTELFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVI
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacttcaggagccgttgggccccaggccctgttctccatgccgcagcgg
cctggctatggcaccatggggaagccaatcaagctgctggccaactgcttccaggtggag
atcccaaagatggatgtctacctctacgaggtagacatcaagcctgacaagtgcccacga
cgagtcaacagggaggtggttgattccatggtgcagcacttcaaggtgacaatctttgga
gatcggaggccagtctacgatggaaagaagagtctgtacacagccaacccactgcctgtg
gcacccacgggggtggaccttgatgtcactcttccaggtgaaggagggaaagatcggccc
ttcaaagtttccatcaagtttgtgtctctggtcagttggcacatgcttcacgaggtgctg
accggacggagcatgcctgagccgcttgagctggacaaacccatcagcaccaaccccgtt
cacgctgtggatgtggtcctgcgacacctgccatccatgaaatacactccagtgggtcgc
tccttcttctcagctccagagggctatgaccatcccctgggaggtgggagggaggtgtgg
ttcggtttccatcagtctgtgcgtcctgctatgtggaagatgatgctgaacattgatgta
tctgccaccgccttttacaaagcccagccagtgatccagttcatgtgtgaagtgctggat
atccacaacatagacgagcagcctcggcctctcacggactctcaccgggtcaaattcacc
aaagaaatcaaaggtttaaaggtggaagtgacacactgtggaaccatgcggagaaagtac
cgtgtttgcaacgtgacccggcgccctgctagccatcaaacgttccctctacagttggag
aacggtcagactgtagaacgtactgttgctcagtacttcagggaaaagtacaacctacaa
ctcaagtatccacacctgccctgtctacaagtgggccaggagcaaaagcacacctacctg
cctctagaggtgtgcaacattgtagccggtcaacggtgcattaagaagctgacagataat
cagacgtccactatgattaaagccacagctcgctctgcacccgacagacaagaggaaatc
agccggctggtgcgcagtgccaactacgaggcagacccctttgtgcaggaatttcagttc
cgagtgcgcgacgagatggcccacgtgacggggcgagtgctacccgcccccatgctgcag
tacggcggcagggtgagcacagagctctttatgaaccgcaccgtagccactcccagccat
ggggtgtgggacatgaggggaaagcagttccacaccggggtggagatcaagatgtgggcc
attgcctgcttcgccacacagaggcagtgtcgggaagaaattctcaagggtttcacagac
cagctgcgtaaaatctcaaaggatgctgggatgcccatccaaggccagccctgtttctgt
aaatacgcccagggtgcagacagcgtggagcccatgttcagacatctgaagaacacatac
gctggactgcagcttatcattgtcatcttacctggaaagactcctgtctacgcggaggta
aagcgtgtgggagacactcttcttggcatggccacccagtgcgttcaggtgaagaacgtg
gtgaagacgtcccctcagaccctctccaacctctgcctcaagatcaatgtgaagctggga
ggcataaacaacattctggtgcctcaccagcgaccatcagtgtttcagcagccagtgatc
tttctgggggcagatgtcacacatccaccagctggggatggaaaaaagccttccattgca
gcggtggttggcagcatggacgctcatcccagcagatactgtgctactgtgcgtgtccag
agacccaggcaggaggtcatccaggatctggcctctatggtgcgcgagctgctcatccag
ttctacaagtcgacccgctacaagccgaccaggatcattttctacagggatggagtttca
gaaggccagttcagacaggtgctgtattatgagctgctggccatccgtgaggcctgtatc
agtctggagaaggagtaccagccaggcatcacgtacattgttgtgcaaaaacgccaccac
acgcgcctcttctgtgccgatcgcaatgagagagttgggcgcagtggaaacattcctgct
ggtaccactgtggatacggacattacgcatccttatgagtttgacttttacctctgcagc
cacgctggaatacagggcaccagtcggccctcccactaccatgtactgtgggacgacaat
tgttttaccgctgatgagttccagctgctaacctatcagttgtgccacacctatgtgcgc
tgcacccgctcagtctccatccccgcgcccgcctactacgctcacctggtggctttccgg
gcccgttaccacctggtggacaaagaacatgacagcgctgaaggcagccacgtgtcaggt
cagagtaacggccgggacccgcaggcgctggccaaagctgttcagattcaccacgacacc
ctgaggaccatgtacttcgcctga
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