Oryzias melastigma (Indian medaka): 112143180
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Entry
112143180 CDS
T07439
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112143180 (irx4a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112143180 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112143180
NCBI-ProteinID:
XP_024122722
Ensembl:
ENSOMEG00000000923
LinkDB
All DBs
Position
LG16:14502120..14508749
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AA seq
468 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSHYTGGQGYGNYVAYGTDASAFYSLGTFDTKEATASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDDDEDGSQEEQIKSENNDDET
RSRPDKDLQLSDLDDFDALESENSECELKHRYHLNTHMSTTTTDCPPEHLVKTASSLKLP
VPLGGEQDLSKSCLKSNPDELQADSRQQPKPCYNQQQQIIDGKPRIWSLAQTATSLNQTE
YPSCMLRCQPSSLTPSPAATSPVTGPDNRQDSPVTTLRNWVDGVFHDPLFRHSTLSQALT
NTTVSWTTNTKGAILEAERSAAALQQLQEPPKDSAMSFPKTINKLFCS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccgtattcgtctgctccacaattcctgatgacaacc
aactctttgactacttgttgtgagtccacgggcagatccatagccgactccggggtggcg
gcatccggacagactccagtctactgtcccgtgtatgagagccggctgctggccacggcg
agacacgagctgagctccgccgcagcgctgggcgtgtacgggagccactacaccggcggc
caaggctatgggaattacgttgcatacggcacggacgcatccgccttctactcgctgggc
acgtttgacacaaaggaagccacagcttctgcacatgcaggaataacccaggcaactgcc
tactacccctacgatccaactttgggacagtatcagtatgacaggtatggctccatggac
gggggaacaaggcggaagaacgccacgcgcgagacgaccagtaccctgaaggcctggctg
caggaacaccggaagaacccatatcccacgaaaggagagaagatcatgctggccatcatc
accaaaatgaccctgacccaggtctccacctggttcgccaacgccaggaggaggctcaag
aaggagaacaagatgacgtggccgcccagaaacaagggttcagaggagaagagatatgac
gacgacgaggacgggtcgcaggaggagcagataaaaagtgaaaacaatgacgatgaaacc
agaagccggcctgataaggatctgcagctgagcgatttggatgattttgacgcactggag
tcggaaaactctgagtgtgagctgaagcaccgctaccacctgaacacgcacatgtccacg
accacgaccgactgcccccccgagcacctggtcaagactgcgtcctccctgaaactcccc
gtccccctcggaggggagcaggacttgagcaaaagttgcctgaaatcgaacccggatgag
ctgcaggcggacagcagacagcagccgaagccgtgttataaccaacagcagcagatcata
gacggcaaacctcggatctggtctttggcccagaccgccacctctctaaaccagactgaa
tacccgtcctgtatgctgaggtgccagccctcctccctgaccccgtcccccgccgccacc
tcgcccgtcacgggccccgacaacagacaggactccccggtcacaacgctgagaaactgg
gtggacggggtcttccacgatcctttgttcaggcacagcactttgagccaggcactgacc
aacaccaccgtctcttggaccacaaacaccaaaggcgccattctggaggcggagaggagc
gcagcggccttgcagcagctgcaagaaccccccaaagatagtgccatgagcttcccaaaa
actatcaacaaacttttctgctcctaa
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