Oryzias melastigma (Indian medaka): 112143195
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Entry
112143195 CDS
T07439
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112143195 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112143195 (prpf31)
Spliceosome [BR:
oml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112143195 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
112143195
NCBI-ProteinID:
XP_024122748
Ensembl:
ENSOMEG00000010384
LinkDB
All DBs
Position
LG16:7147809..7152635
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AA seq
507 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPEGEEGGSDGEGVTGRTEGLEDIPEEMEVDYSKTDSI
TSIAKLRNSKQFSDIMEKISGYIGKQRKNSDVSGPVEADPEYRLIVAANNLTVEIDNELN
IIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVS
VTASTTQGSLLTEDELKQLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDLR
RKAARLVAAKCTLASRVDSFHESPDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAA
EKKVAEANQKYFSNMAEFLKVKKEAKN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggctgacgaacttctggctgacctggaggaagctggagatgagggggaagac
ggtctgtacccggagggggaggaggggggcagtgatggagagggggttacagggaggaca
gaaggactggaagatattccagaggagatggaggtggactacagcaagactgacagcatt
acgtccatcgccaagctccgtaatagcaaacagttttcagatataatggaaaaaatatct
ggatatatcggaaaacagcgcaaaaattcagatgtttcaggaccagttgaggctgaccca
gaatacaggctgatcgttgcagccaataatcttacagtggaaattgacaatgagctcaac
atcattcacaagtttacaagggacaaatactccaagagatttccagagctggagtctttg
gttccagattctttagattatattcgcacagtcaaggaattgggaaataacctggagaaa
tgtaaaaacaacgaaacgctgcagcaaatcctaacaaacgccaccattatggtcgtcagt
gtcactgcatcaaccacacaggggtcattgctaactgaagatgagctgaagcagcttgag
gaggcttgtgatatggctctggagctgaaccagtccaaacacaggatatatgaatatgta
gagtccagaatgtcctttatagctccaaacctgtctatcattgtgggagcatcaactgca
gcaaagatcatgggcattgctggaggcctaacaaacctctcaaagatgccggcctgtaac
ctgatgctgctgggagcccaaaggagaactctgtcaggcttcagtagcacgtccctgctt
cctcacacaggcttcatctaccactgtgatgttgtgcagtcgttgcctcctgacctcagg
aggaaggcagctcgtctggtggctgcgaaatgcactctagcttctcgagtggacagtttc
cacgagagtccagatggaaaggttggctatgacctaaaagaagaaatagagagaaagttt
gataaatggcaggaacctccaccagtgaagcaggtcaaaccactgccagccccgctggac
ggacagaggaagaagagaggaggaagaaggtatcggaaaatgaaagagcgtctggggctg
actgagatcaggaaacatgccaacagaatgacctttgctgagattgaagatgacgcctat
caggaggatctgggtttcagtttgggtcagctcggtaagagcggcagcggcagagtgagg
caggctcaggtcaacgaagccaccaaagcaagaatctccaaatccctgcagagaacactg
cagaagcagagcatgacgtacggagggaaatccacagtgagggaccgttcctcaggaacc
agctccagtgtggcgttcactcccctgcaggggctggagattgtaaacccacaagctgca
gagaagaaggtggctgaagcaaaccagaaatacttctccaacatggcagagttcctcaaa
gtcaagaaggaagcgaagaattaa
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