KEGG   Oryzias melastigma (Indian medaka): 112143267
Entry
112143267         CDS       T07439                                 
Name
(RefSeq) M1-specific T cell receptor beta chain
  KO
K10785  T-cell receptor beta chain V region
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04020  Calcium signaling pathway
oml04514  Cell adhesion molecules
oml04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    112143267
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112143267
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112143267
SSDB
Motif
Pfam: C1-set V-set Ig_3 Ig_2 C2-set_2 Marek_A
Other DBs
NCBI-GeneID: 112143267
NCBI-ProteinID: XP_036065803
LinkDB
Position
LG22:1906666..1920615
AA seq 301 aa
MSSPVKTFGFLCVWFCCQAGAVTFHQSSSLIVKERSEVHINCRHDDSALILMLWYRRSED
AAMTLIGYGYETSQNYEGQMEQEFTLARKGTVEGVLTVREARQKHSAVYFCAASTNNYEP
AHFGSGTKLTVLDPDKEITPPTKVRVLKPSKNERKNEQKTLVCVASGFYPDHVSVSWKID
DDVVDVTLDHTKAVATDDAARLDNKTYTITSQLIVSSDIWFSNCVFICNVSFFNGTHTVF
RDGNTTGGGIRTDLTRDKYLWITQSAKLSYIIFIAKSCAYGVFIWFVAWKLQRSAAKKSK
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcttcacctgtgaaaacctttgggttcctctgcgtctggttctgctgtcaggcgggc
gccgtcaccttccaccagtcctcttctctcatcgtgaaggagaggagcgaggtccacatc
aactgcaggcacgatgacagcgcccttatcctcatgctgtggtaccggcgctcagaggac
gccgccatgacccttatcgggtacggatacgaaacaagtcagaactacgagggccaaatg
gagcaggagttcacgctggcgaggaaaggcaccgtggagggggttctgactgtacgggag
gcgaggcagaagcactcggcggtgtatttctgcgccgccagcacgaacaactatgaaccg
gctcactttggatctggaaccaaactgacggttttagatccagataaagaaatcacgcct
ccaactaaagtccgagttcttaaaccttcaaaaaatgagcgcaagaacgagcagaagacc
ctggtttgtgtggcgtctggcttctatccggatcatgtcagcgtctcctggaagatcgat
gacgatgttgttgatgtgactctggatcacacaaaagctgtggcaacagacgacgctgcc
aggctggacaacaagacctacaccatcaccagccagctgatcgtctcctctgacatctgg
ttctccaactgtgtgtttatctgcaacgtcagcttctttaatggaacacacactgtgttt
cgtgatggaaacaccaccggtggcgggataagaactgatctaaccagagacaaatatctg
tggatcactcagagcgccaagctctcctacatcatcttcatcgcgaagagctgcgcctac
ggagtcttcatctggtttgtggcctggaagctgcagagatctgcagcaaagaagagcaaa
aagtga

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