KEGG   Oryzias melastigma (Indian medaka): 112143323
Entry
112143323         CDS       T07439                                 
Symbol
thrap3a
Name
(RefSeq) thyroid hormone receptor-associated protein 3 isoform X1
  KO
K13112  thyroid hormone receptor-associated protein 3
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112143323 (thrap3a)
Spliceosome [BR:oml03041]
 Complex B
  Other components
   Complex B specific factors
    112143323 (thrap3a)
SSDB
Motif
Pfam: THRAP3_BCLAF1 DUF6212
Other DBs
NCBI-GeneID: 112143323
NCBI-ProteinID: XP_024122969
Ensembl: ENSOMEG00000019164
LinkDB
Position
LG16:2869686..2915717
AA seq 917 aa
MTRSTKSASRSRSPSRSRSRSRSRSRSSSQSRSRSRSRSRKRHYSSRSRSRSHSPFHNRE
KKYPRAYQQQNNREFRGYHRGFRRPYNFRGRGRGQFPRGRYQRGGGGYNNNNNNYRPNWK
NYKQYPQKYQQWQQYPQQQQQQFNFPQGRPHNNLQNRSGTPPQGQSHRSDRSSSPVSRHS
HHSSSSSHSSPPKARPATVPAQTSEDVKDEQLTSKQVQKVGEEDEEPEEPSVELLEENPA
DGAGSGKSDGKKNCLGTGSVAQNSHSPGQTSNTKVSNDTSNGAPVWQSAGGSCSTRKASH
EGLNPMLSSFDFFSTEEFQEEDKKAISIAFRKFLEEQSKKANSAVENSKTEAEDGGLEKG
KVNGKTSATVSDSASEKCREKTKGDVSLNSFLKTSPFLSAEGEEEDDEILNRPSLKFLFK
DLHNGDESCKPKISVSHSGQKPFGECFRKQNAAYSQFTNGEFNSTVEERWAERKQDKAIA
AVLAKRELTEKFEDLSPEMSFKTKMMAGSPSALSSAAARSGSSNREMFMMREQDTTAVSS
RKQEAKFHVRMGFLGDNLISSSDILAEERQLSQDLVLSSKKDPEFRSIFQHVQNAQSQRS
PSELFAQHIVTIVHHVKTQHFPSSGLTLNERFTLYQREAAEQETKKSRKSPEIHRRIDVS
PSAFKKPPQLFGGAKSSEEGTYKSAGEKVKGDAMDLRLDIERRKKYSCFQNQNQEIDVGD
SPDFSSELCEQNLSKYCNKSNDQKRRRSSSSSSSSSSKSQKLETQDKSELKDEEFHKTKP
CQRESTVPAQGGRPLGDFQIQICGRSWNKSSFQENTSYSSSMNSAHPESKGWDPEFTPKN
RKYYLHDDRDEESKWTDKREPGQGNQSLGRARFIIRKATGGASKTSLKWPFEKFQANGDT
SGKKGEEADQDHREEEK
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgaccagatccaccaaatctgcctcgagatctcgcagcccctctagatccagatccagg
tccaggtccaggtcccggtcctcctctcagtccagaagtcgctccagatcccggtccagg
aagcgtcattacagctccaggtctcggtcaagatctcactctccgtttcataaccgggaa
aagaaatacccaagggcataccaacaacagaacaaccgggaattccggggctatcaccgc
ggcttccgaaggccatacaatttcaggggtcgaggacggggccagttcccccgaggacgc
tatcagcgtggaggaggcggctacaacaacaacaataacaactatcggccgaactggaaa
aactacaaacagtacccgcagaaataccagcagtggcagcagtatccacagcagcagcag
cagcagtttaacttcccacagggacgaccgcacaacaacctgcagaatcgctcaggaacc
cccccccagggtcaatctcaccgctctgacagatcctcctcccctgtatccagacactcg
catcattcttcctcctcgtcacactcctcccctccaaaagccaggccagccacggtgccg
gcgcagacctcagaagacgtcaaagatgagcaactgacctcaaagcaggttcaaaaggtc
ggggaggaagacgaggagccggaagagccgagtgtggagttgttagaggagaaccctgca
gacggagcaggtagtgggaaaagtgatgggaagaaaaactgtttggggaccggttctgtc
gctcagaacagccacagtcccggccagaccagtaacactaaggtctcaaatgatacaagc
aatggcgcccccgtgtggcagtcagctggtggctcatgctccactaggaaagcctcacat
gaaggtctgaacccaatgctttccagctttgacttcttctccaccgaggaatttcaggag
gaggacaagaaagcaatctccattgcattcaggaaatttttggaggagcaaagcaagaaa
gccaactctgctgtggaaaactcaaagacggaagcagaagatggaggtttggaaaaagga
aaagtaaacggcaaaacgtctgcaaccgtttccgactctgcttcggaaaagtgcagagaa
aagacgaaaggggatgtgtctttgaacagctttttaaaaacatccccgtttctgtccgct
gaaggggaggaggaagacgatgagatcctcaataggccttctttaaagtttctctttaaa
gacttgcacaatggcgatgagtcctgcaagccaaagatcagtgtctctcattcaggccaa
aaaccctttggagagtgctttagaaagcagaatgcagcctactcacagtttactaatggt
gagttcaactccacagtggaggagagatgggctgagagaaagcaggacaaagctattgct
gctgtgctcgctaagagggagctaacagagaaatttgaagatttgtctccagaaatgagc
tttaagacaaagatgatggcgggatccccctctgcgctctcctctgccgctgctcggagt
ggaagctccaacagagagatgttcatgatgagggagcaggacaccaccgccgtgtcctcg
aggaagcaagaagcaaagtttcatgtacgaatggggttccttggagataatctgataagc
tcttccgatattctagctgaagagcgccagctgtctcaggacctcgtgctgtcctccaaa
aaggatccggagtttcgctccatctttcagcacgtccagaacgctcagtcacaaagaagt
ccctctgagctgttcgctcagcacattgtcaccatcgttcaccacgtcaaaactcagcac
tttccgtcctctggcttgactctaaacgagcgattcaccttgtaccaaagagaagctgca
gagcaggaaacgaagaagtccagaaaaagcccagagatacacaggagaattgatgtttca
ccaagtgcttttaagaaaccccctcagctttttgggggcgcgaaaagctcagaggaaggc
acttacaagagcgctggggaaaaagtaaaaggcgacgcaatggatctacgtttggatatc
gagcgtcggaaaaagtattcttgcttccaaaaccagaatcaagaaatagacgttggagac
tctccggatttcagcagcgagctgtgtgaacaaaacctctccaaatactgcaacaaatca
aatgatcagaagcgaagacgctccagctcatcctcctcttcctcttcctctaaatctcaa
aaacttgaaactcaagacaagtctgagttaaaagatgaagaatttcacaagacgaagccg
tgccaaagagagtccacagttccagctcaaggaggacggcctctgggagattttcaaata
caaatatgtggaagaagctggaacaaaagcagttttcaggaaaacacttcctacagcagt
tctatgaatagtgcacacccagagagtaaaggctgggatccagagtttactccaaagaac
aggaagtactacttgcacgatgacagagatgaagagtccaagtggacagacaagagagag
ccaggacaggggaaccagtcccttgggagagcacgattcatcatccgcaaagccactgga
ggagccagcaagaccagccttaagtggccgtttgagaagttccaggccaacggggacacg
agtggaaagaaaggagaggaagcagatcaggatcacagagaggaagagaagtga

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