Oryzias melastigma (Indian medaka): 112143334
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Entry
112143334 CDS
T07439
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112143334
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
112143334
NCBI-ProteinID:
XP_024122985
Ensembl:
ENSOMEG00000003259
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All DBs
Position
LG16:complement(9761884..9773821)
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AA seq
823 aa
AA seq
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MKANQERSNGCLPPKKREILALEQRPVVVAAATPPAVVSNDSPHTENLAWLASVASERCK
SRDADSPRCTVPSASSSSPSTSIPSQATPLSAVPLASLPAVYPTALPQQAGTIHFAQLAP
NVQFISSGPYAGYISSHIISTNASSVPNSSAIVGQRPHLDGYTAAVVSPNAKGEQQFQIG
ISPTELTSVSVSSSPQVTSQYIHLDSRTPLTVSGNAVTSPTGHLQLHPHATVLPQTLTLA
PSQLVVQYADGSAGKKPEGHAKGVLNGDLEMVKQAKGTSQQANHQQVQSYEARHILLPAD
YGQNPAGLQTSLVLVAQPNSGAEHDPNSSKISLVQTEKGNICLGKQVSRTSSFTSLSSPE
MVKSVAPHAVIQTTLPSEELPANLYSTTQPPIIGYITSANQHTVSYHAALPQHLVIPSGQ
SLLIPVSSANNGTELEVSRSVSALTATTTPQISTAMPHAYLATALSKCEALGPDGHQTPH
AVAQPPALPVLSTNPVSTEVAAPSPAPALVPTPAPVSVQASPSVSSPPSPVALPPFFMRG
SIIQLADGELKRVEDLKTEDFIQSAEISNELKIDSSTVERIDTGQSPNAVVIQFSVGELK
AQVCVEVLVEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRSLKNGSVTD
SHTFGAKLKMGHIPDSSPNMDANARNRVSSEAADGNCGLLMKASGAERMERQHAAGSGGG
VGTFPRQGEGIYTATAQVTVEARQESSKTDTSAPSKQLVDQEKPSVRKRRWSAPERDQTE
RAEEEEPPVTLPKPSFIPQEVKISIEGHSSSGSEMCANKRVNC
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaatcaagagcggagcaatggatgcttgcctcctaaaaagcgagagatactt
gctctggagcagaggccggtggtagtggctgcagcaacacctcctgctgttgtgtctaat
gacagtcctcacacagaaaacctggcatggctagccagtgtggccagcgaacgctgcaaa
tccagggatgcagacagcccaagatgtactgttccatccgcttcatcctcctccccttct
acatctattccttctcaagctactcctctttctgcagttcctttggcctccctgcctgca
gtttatccgactgcccttccccagcaagctggcactatccactttgctcagttggcgccc
aatgttcagttcatcagctctggaccttacgctgggtacatttcatctcacatcatctca
actaacgctagttctgtacccaacagttctgccattgttggacagcgaccccatttggat
ggttacactgctgccgttgtctccccaaatgccaaaggagaacagcagtttcaaataggc
atctccccaactgagttaacctctgtgtcggtttcaagttctcctcaagtgacgagccag
tacattcacctggacagcagaacacctttgactgtcagcggaaacgccgtcacgtctcct
acgggccatctccagctccacccgcacgcaactgtcctccctcagacactgacactggct
ccatcacagcttgtagttcaatacgcagatggttcggctggaaagaaaccagaaggccat
gctaagggcgtgctgaatggggatttagagatggtcaaacaagctaaaggcaccagccag
caagcaaatcatcagcaagtccaaagctatgaggcgaggcacatccttctacccgcagac
tatggccaaaaccctgcagggctccagacttctttggtgctagtggctcagcccaactct
ggggctgaacatgatcctaactcaagtaagatctctttagttcaaactgaaaagggaaac
atctgtttgggaaaacaagtgtccagaacctcttctttcacttccctttcgtctccagag
atggtgaagtctgttgctcctcatgctgtcatccagaccactctaccttctgaggagctt
ccagctaatctctactccaccacacaaccacccattatcggctatatcaccagtgcaaac
cagcacactgtcagctaccatgcagctctaccccagcacctggtcataccaagtgggcag
tctctcctaattccagtcagtagtgcaaataatggtacagaactagaggttagtcgtagt
gtgagtgccctgactgccaccacgacccctcagatatccaccgccatgccccatgcctat
ctggctacagccctttccaagtgtgaggcacttgggccagatggacatcaaacaccccac
gctgtggctcagcctccagcgttgccagtactctccacaaatccggtttccactgaagtg
gcagccccatctccagctcccgcccttgttcccacacctgcccctgtttccgtccaagca
tccccctccgtctcctctcccccatcacctgtggcacttcctccatttttcatgcgaggc
tccataatacagctggctgatggggagctgaagcgggtggaggacctgaagacagaagat
ttcattcagagtgctgagatcagcaatgagctgaagattgactccagcaccgtggagcgc
attgacactgggcaaagtcctaatgctgtggtcatacagttttcagtaggagagctaaaa
gcccaggtgtgtgtggaggtgctggtggaataccctttctttgtttttggtcagggctgg
tcgtcctgctgccctgacaggaccacacagctgttcgagctgtcctgcgctaagctgtgc
gtgggggacgtttgcgtgtcgctgaccctgcgcagtctgaagaacggttcagtgacagac
agccacacttttggggccaaactgaagatgggccacatccctgactcctcccccaacatg
gatgctaacgcgaggaaccgtgtgagctctgaagctgcagatggaaactgcggcctcctc
atgaaagcttccggtgcggaaaggatggagcgacaacatgcagccggatctggaggtgga
gtgggaacttttccaagacagggagaaggaatctacacagcgactgctcaagtaactgta
gaagcaaggcaggaatcatcaaaaacggacacgtctgccccctctaaacagctcgtcgac
caagagaaaccctcagtccggaagagacgctggtcagctccagagagggaccagactgag
cgagccgaggaggaggagcctcctgtgactcttcccaaaccttccttcatccctcaggag
gtcaaaatcagtatagagggtcactccagctctgggagtgagatgtgtgcaaacaaaaga
gtgaactgttag
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