KEGG   Oryzias melastigma (Indian medaka): 112143353
Entry
112143353         CDS       T07439                                 
Symbol
sde2
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oml03041]
    112143353 (sde2)
   03032 DNA replication proteins [BR:oml03032]
    112143353 (sde2)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112143353 (sde2)
Spliceosome [BR:oml03041]
 Complex C
  Other components
   Complex C specific factors
    112143353 (sde2)
DNA replication proteins [BR:oml03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    112143353 (sde2)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112143353 (sde2)
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert Exonuc_VII_L
Other DBs
NCBI-GeneID: 112143353
NCBI-ProteinID: XP_024123025
LinkDB
Position
LG16:complement(18244375..18245617)
AA seq 386 aa
MKKKLRMRGSFGSRMEVFVVVPRSRGSVFVFPRGSVVEDVLDRFVPQQNFYVTSNGRLAP
GQAPLQDGGVYRLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKE
MAEWLKKQAEREAEKEQRRLERLQRKLAPPKHQFCDPEYQQQCHHLSERLEDSVLKGLQA
SSSAQAAADDITTVKRASSTAESEAPPQKKKKKAAAGGGASASFWTGLEDLEELQSSGDE
EESLSSQAACRPVTTATEAEPSACRPVTMATEAEPTACRSSSADHVSGPAAEPAAEPDVV
SPKEQRPPEAQESCHQSQQVDLSLVVSVQQLELLGPDVLKAELQRRGLKCGGTLQERAAR
LFSVRGLSPGQIDPALLAKPAKAKKK
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaagaagaagctgcgcatgcgcggttcgtttggaagcaggatggaggtgttcgtcgtg
gttccgaggtccagagggtctgtctttgtgtttccgcgcggctctgtggtcgaagatgtt
ctggaccggttcgtcccgcagcagaacttttacgtcacttcaaatggtcggctggcgccc
ggccaggcccccctacaggatggaggcgtgtatcgcctggagccccgcctctgtgggggg
aagggaggtttcggctccatgctgcgagctctgggcgctcagatcgagaagaccaccaac
cgagaggcctgcagggacctgagtgggcgtcgcctccgagacgtcaaccacgagaaagag
atggcggaatggctgaagaagcaggcggagcgcgaggcggagaaggagcagcggcgcctg
gagcgcctgcagaggaagctggccccgcccaaacaccagttctgtgacccggagtaccag
cagcagtgccaccacctgagcgagaggctggaggactctgtgctcaaaggtttgcaggcg
tcctccagcgctcaggcggcggccgatgacatcaccacggttaagagagccagcagcacg
gcggagagcgaggcgccgccgcagaagaagaagaagaaggcagcggcagggggtggagca
tcagccagtttctggacgggcctggaggatctggaggagctccagagctccggagacgag
gaggagtctctgtcgtcacaggctgcctgcagaccggtcaccacggcgacagaggcggag
ccttcagcctgcagaccggtcaccatggcgacagaggcggagcctacagcctgcagatcc
tcatccgctgatcatgtctctggacctgcagcagaacctgcagcagaaccggatgtcgtg
tccccaaaggagcagagacctcctgaagcgcaggagtcctgccatcagtcccagcaggtg
gacctgtccctggtggtgtccgtacagcagctggagcttctgggtccagacgttctgaag
gcggagcttcagcggcgagggctaaagtgtggcgggacgctgcaggagcgcgccgcacgc
ctcttctccgtcagaggtctgagcccgggtcagatcgacccggctctgctggccaaaccc
gccaaggccaagaagaagtga

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