Oryzias melastigma (Indian medaka): 112143413
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Entry
112143413 CDS
T07439
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112143413 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112143413 (trip13)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
112143413 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_25
AAA_14
Viral_helicase1
AAA_24
KAP_NTPase
NPHP3_N
AAA_5
RNA_helicase
TIP49
ATPase_2
NACHT
AAA_28
Cytidylate_kin
AAA_17
AAA_33
ABC_tran
TsaE
AAA_7
RuvB_N
ATPase
AAA_30
AAA_11
bpMoxR
DUF815
SLFN-g3_helicase
IstB_IS21
Rad17
AAA_19
Mg_chelatase
DUF6393
PduV-EutP
NTPase_1
PhoH
nSTAND1
AAA_3
Cytidylate_kin2
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
112143413
NCBI-ProteinID:
XP_024123129
Ensembl:
ENSOMEG00000022037
LinkDB
All DBs
Position
LG16:9951057..9956190
Genome browser
AA seq
419 aa
AA seq
DB search
MDGDEMDVAFKQSINVEVHVKSQSTAKLSEVKLRVQTLLDRHRTVFGNYRWTEFDDEFLS
RHVESVSVVDLDEMMEQPVDLNNCTVSIFTLNEDGPSMLSLEEEELSAANHWLLPSAEFH
GIWESLVYETGVKTKLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALA
QKLSIRLSDRYSYGQFIEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKEALVFVLIDE
VESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAFVDRA
DIKQYIGPPSEKGIYNIFVSCLEELMKCQIISPRQPLFTMYELETMCFTSSEVSEHSLWL
MDIAKKSKGLSGRALRKLPFLTHALFVKTPTVTLETFLDAMSHAVDKQREEKSNLINNV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatgaaatggacgtggcatttaaacaaagcataaacgtagaagtgcacgtc
aagtctcaaagcactgccaaactgtctgaggtgaagttgcgggtgcaaacactgctggac
cgccaccggacggttttcggaaactacagatggaccgagtttgacgacgagtttctctcc
agacacgtggaatctgtgtcagtggttgaccttgatgaaatgatggaacagcctgttgat
ttaaataactgcactgtctccatctttacgctgaatgaagatggaccgagcatgctcagt
ttagaggaggaggagctttcagctgcaaatcattggttgctgccatctgctgaatttcat
ggaatctgggaaagtcttgtttatgagactggagtcaaaacaaagcttctggattacgtc
actacaaccatttacttctctgacaaaaatgttgacagcaacttaatttcatggaaccgt
gttgtgctgcttcatgggcccccgggcactggaaaaacatccctgtgcaaagctcttgcc
cagaaactgtcgatccggctgtcagatcggtattcatacggccagttcattgaaatcaac
agtcacagcttgttctcaaagtggttctcagagagcggaaagttggtcacaaagatgttt
caaaagattcaagaactgattgatgacaaagaagctcttgtgtttgttttaatagatgag
gtagagagtctgactgctgccaggaatgccagccaggcaggaacggagccctctgacgcc
attcgagtggtcaactccgtcctaactcagctggaccaaatcaaacgacattccaatgtg
gtgatcctcacaacatccaacgtgacagaaaagatcgacctggcgtttgtagacagagcc
gacatcaagcagtacatcggacccccgtctgagaaaggcatctataacatctttgtctcc
tgtctcgaggagctaatgaagtgccagatcatctcccctcgccagccgctgtttaccatg
tatgagctggaaacgatgtgtttcactagcagtgaggtgtctgaacacagcctgtggcta
atggacatcgcaaaaaagagcaaaggtttgagcggaagagctctgaggaaattgcctttt
ctaacccatgcactctttgtgaagacacctactgtaactcttgagacgtttctggatgct
atgagtcatgcagtggacaaacaaagagaggaaaagtccaatctgatcaataatgtctga
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