Oryzias melastigma (Indian medaka): 112143415
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Entry
112143415 CDS
T07439
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112143415
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112143415
04082 Neuroactive ligand signaling
112143415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112143415
Ion channels [BR:
oml04040
]
Ligand-gated channels
Glutamate (ionotropic)
112143415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112143415
NCBI-ProteinID:
XP_024123132
Ensembl:
ENSOMEG00000011220
LinkDB
All DBs
Position
LG16:complement(6799607..6861646)
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AA seq
1973 aa
AA seq
DB search
MRTLYRHPLLVRYISAPPSPRQVAMVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERD
AGTMMNFNIAVIHAGATVQAEAAVAGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQ
VNDSSPKTVLSQLCELLAARPLQGLVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGG
GAGLGRMPQESGSIFLQFSSSTALQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEG
LTDGSFIGWEKKSVVILNVTDDPGGARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAG
QAGASHMWFAVGPALSGLGTENLPRALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKE
YGTTGGPNFVTNCMTDANQTQRLRGRMRYFSNITLGGRDYSFNVEGYLSNPFLDVISWTP
GRGWEDVGWWENGVLRLRYPAWSRYGPFLKPPDDAQHLRVVTLEERPFVIVELADAASGT
CIRDSVPCRRPLNASAIHEGMAPLKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKK
IDGVWNGMIGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA
FLEPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQTGKKAGGSTFTIGKSVWLL
WAIVFNNSVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDK
KFQHPEEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMGKYNQKGVEEAILNLKTGKLDAF
IYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEI
EMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHC
MATSSGKLDFLLAISRGMYSCCSFEDETAPSGAKSLPSHHHTAMVTVSSQPHVVSTSMTN
PALAMAQQQQQPQQQQQPQPVYKTPLPGSPPTVLHSGTALGSSSNPIAGAPLPCSTFLPR
PDRRLAVVDRWRLPKTVAATNPMAVRGAINDMGPFAQKVPPNWASAAGGGGGLDGYKRYY
GPIDPEGLGPCMEQQVGTQTPKTMPRGHPQPPPASVAFFSEKNMDHGVGKKVVGGGGGGQ
GKGTVKPLGTPRLPPKSQAPLPPTPPLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILP
LGRRGGARDGVRDGGGRRARPLSPPLSLPVPVPLSPSYTPPSPSASLHYTSSSASSTTSS
TSSSSSASSSRSSSPTYSYSSSRSADDRTGGLDGEDDDDEELTEESSLLLGRGRERERSI
IRPRSLSHGRLPPPIPPRKPRTSWGDRERERERERGGSQLSQLQEWWASWNDRDRRGSVG
DAERQKMVKRRRKEKEKEKKRKKKNKKRKKREERERERERERKRRKVKKKKKALKTKKRK
KSIGGKRSEPEEGDVELEREGEPEGEREGGIQDYASFSSQYRNTFAEKGRDSWEGERERN
RREGGEEGIDREEEESRRSRERRPKSSHSHSRHNTTSKRYPNLNKLPASVKFWGNGRGDG
SNAHPSSFHPLLPSSKRRRGGRTDREDSSKVGERRPLLMRYEKEKAQTREGLSFHEWDSD
EEDDDEEEERNDARERLEERGRRTGRGTVSESERDRTRLEDSYSDEGSSGEFGRFERYWD
EGAGGGTGIGGIGGGGWFFGTYPSREKGGSINSRDDSLLGTRAEGWFGGDFWGSGPGVGW
GSGGGSGGLGSQWPPPPAAFPPPRRYWSMDKIPVKGEKKLKRGGAKSKGRSRELGEEAGR
STMCSCSLYPHPHPYPHPHSRSQTSHSKRGSSAHSHSQEELIPHCHSFSGGSHPKSLPSK
PDSSQAKSGSQSNLSLSTQPTDHPPPPTPSSPQQATSLPMPIPPPPSSSSISPPAGVGIA
GQAQASASAKLQYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacactttacaggcaccctctcttagtgagatatatatctgcccccccttcccct
cggcaggttgccatggtcgccatacctactctctctctcctattggtcctggcagagtgg
gcaggtctggtggacgcgtccccccacctcctgctccggccgagcccgcgggagcgtgat
gcggggaccatgatgaacttcaacattgctgtgatccacgccggtgccacagtgcaggca
gaggcggcggtagcggggcccggggggagggtgctgtaccccggcttcggccgggtttat
ggctccctgggggagagcgtggtcacccaatggggctctgctaacgtcatctggctgcag
gtgaatgacagcagtcctaagacagtgctgtcccaactgtgtgagcttctggcggcgcgg
cccctgcagggtctggtttatgaagaggagagacctcctcgcactgcctggggtcctctg
gcccccatgctggagtttgtctctgcacagacaggattgcccatagtggctgtaggagga
ggagcaggcctggggaggatgccacaggaatcaggttccatctttctccagttcagctcc
tccactgctctacagctggaggtcatctttgaggtgttggaggagtacgattggactgct
ttctccgtggtgtccactcgtcaccatggctaccaggacttcctgtctgtggtagaaggg
ctgactgacggctccttcattggctgggagaagaagagcgtggtgatcctgaacgtgact
gacgaccctgggggggcacgcacgcgcaggctgctgaaggagaacgaggcgcaggtgcgc
ctgctgtactgctcccaggaagaagccgagctggttttcaaagccgcctgggcggcgggt
caggcgggagcctctcacatgtggtttgcggtggggccagctctctcaggtttgggcacg
gagaacttgccccgggctttatttgccgtccggccccagggctggagggatgaacctcgc
cgaaggatcgcccgaggtgtgtctgtgctgactcacggggcagtcgccatgcggaaggag
tacggaaccacgggagggccaaactttgtcaccaactgcatgacggatgccaatcagacc
caaaggctgcggggcaggatgagatattttagcaacatcacacttggtggtcgagactac
tctttcaacgtggaaggctacctgtctaaccccttcttggatgtcatctcctggacacct
ggacgtggatgggaagatgtaggctggtgggaaaacggcgtgctgaggcttcggtatcct
gcctggtcgcgctacgggcctttcctaaagccacctgatgatgcccagcacctgcgtgtt
gtcacgctggaggaaaggccatttgtcatcgtggagctcgcagacgctgcatctggaacc
tgcatccgtgactcagttccctgcagacgcccccttaatgccagtgctatccatgaggga
atggctcccttgaagcagtgctgcaagggcttctgcattgacatcctcaagcgactggcc
aagattgtcgggttcacctatgacctttacttagtgaccaatgggaaacatgggaagaaa
atcgatggggtttggaacggcatgattggggaggtggtgtacaagcgggcagatatggcc
attggctcattgactatcaatgaggagaggtcagaggtcgtggatttctctgttcccttt
gtggagacaggaatcagtgtcatggtctcccgtagcaacggaactgtatctccatcagcg
ttcttagagccttacagtccagcggtgtgggtgatgatgttcgtcatgtgcctgactgtt
gtggcggtgacggtcttcatttttgaattcttcagccctgtgggttacaaccgcagcctt
cagactggcaaaaaggctggagggtccactttcactattggaaaatccgtctggctcttg
tgggccatcgtcttcaacaactctgtgccagtggagaacccgagaggaaccacgagcaag
atcatggtgctgatctgggccttctttgctgtcatatttctggcctcctacactgctaac
ctggctgccttcatgatccaggaggagtacatcgatactgtgtcaggcctgtcggacaag
aagtttcagcatccagaggagcagtacccacctctgaagtttggaacggtgcccaacggg
agcactgaaaaaaatatccgctccaactacccagacatgcaccagtacatgggaaaatac
aaccagaaaggagtggaagaagccatactgaacctcaagactgggaagctggacgctttt
atttatgatgctgcggtattgaactatatggccagaaaggacgaaggttgtaaggtgatg
accataggctcggggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaac
tcacgctggaaacgtcctcttgacctcgccctactgcagctggtgggagatgatgaaatt
gaaatgctggagcgcctctggttgtcaggcatctgccataatgacaaaattgaggtgatg
agcagcaagctggacattgacaacatggctggggtcttctacatgctcctggtggccatg
ggcctcagtcttctcgtttttgcctgggaacatttagtgtactggaagctccgtcactgc
atggccactagttctggcaaactggactttctcttggcaatcagcaggggcatgtatagt
tgctgcagctttgaggatgaaacggcaccaagtggagctaaatctttgccttcacatcac
cacactgcaatggttacagtttcatctcagccacatgttgtctcaacatctatgacgaac
ccagctcttgccatggctcaacagcagcaacaaccccagcagcagcagcaaccgcagccg
gtctacaaaacacctctaccaggttctcctcccaccgtgttgcattctgggacagcactg
ggttcctccagcaaccccatcgctggtgcgccccttccttgctccactttcttgccaagg
ccagaccgtcggctggctgtggtggatcgctggagactgcccaaaactgttgcagccacc
aaccccatggctgtacgaggggccatcaatgacatgggaccctttgcacagaaagtccca
ccgaactgggcttcagcggctggaggaggtggggggcttgatggctataaaagatattat
ggtcccattgaccctgagggactggggccctgcatggagcaacaggtagggacccagacc
cccaagactatgccgaggggccacccccaaccccctccagctagcgtggccttcttctca
gagaagaacatggatcatggggtggggaagaaggttgtgggaggtggcggtggaggtcag
gggaaaggcactgttaaacctctgggtactcccagactgcctcctaagagtcaggccccc
ttgcctcctacacccccactgccacacccctctccccctcttccttcatccttctggaga
aaacgcaggcccaaaaaacccaaagagcctggtggaccactctacgagaacattctacct
ttaggacgaagaggaggagcacgagatggtgtcagggacggaggagggaggagggcacgt
cctctttctccaccactctcacttcctgtaccagtgccgctcagtccctcctacactcct
ccttctccctcagcatccttgcactatacctcctcatccgcttcgtcaaccacctcgtcc
acgtcctcttcgtcatctgcatcgtcgtctcgctcctcgtctcccacgtattcttacagc
tcctccaggagtgcagatgacagaactggaggactagatggagaagatgatgatgacgag
gagctgacagaagagtcaagccttctccttggaagaggaagagagagggaacgctcaatc
atccggcctcgttccctcagccacggccgcttgccaccccccataccccccagaaaacca
cgcacatcctggggtgacagagaaagggaacgagagcgggaaagaggaggtagccagctg
tcccagctccaagagtggtgggccagctggaatgacagggaccggcgtggaagtgttgga
gatgctgagagacaaaaaatggtgaagaggaggaggaaagaaaaagagaaagaaaagaag
agaaagaaaaagaacaaaaagagaaaaaagagggaagaaagagaacgagagagggagaga
gagaggaagcgtaggaaggtgaaaaagaaaaagaaggcgcttaaaactaagaagaggaag
aaatccattgggggaaaacggtctgagccagaggagggagatgtagaactggagagagaa
ggagaacctgagggggagagggaaggaggaatacaagactacgcttccttttcttcccag
tatagaaacacatttgcagagaaagggcgggactcatgggaaggggaaagggagaggaac
aggagagagggaggagaagagggcattgacagggaagaggaggaaagtagaagaagcagg
gagagaaggccgaaatcttcacattctcattccagacataacaccaccagtaagcgctat
cccaacttgaataaacttcctgcatctgtaaaattttggggaaatggtagaggagatggg
tcaaatgctcatccgtcatcctttcatccacttcttccatcttccaagcggagaagaggt
ggaagaaccgatagagaagacagcagtaaagttggagagcgtcgtccattgttaatgcgc
tatgaaaaagagaaagcgcagactagagaagggctgtcctttcacgaatgggactctgat
gaagaagatgatgacgaagaggaggagaggaatgacgctagagaacgtttggaggagagg
ggaaggagaacaggaagggggacagtttctgagtcagagagggacaggaccaggctagaa
gacagttactcagacgagggatcttcaggggaatttggccgttttgaaagatactgggat
gaaggagcaggaggtggcactggaatagggggcataggtggaggaggctggttctttggt
acttacccctccagagagaaaggaggtagtatcaacagtcgagatgattctttactggga
accagagcggagggctggtttggaggtgacttttggggctcagggccaggtgttggttgg
ggatctggtggagggagtggagggttgggctcacagtggccacctcctccggcagccttt
cctcctcctaggcgatactggtctatggacaagattcctgtcaaaggagagaaaaagtta
aaaagaggaggagccaaaagcaaagggcgaagtagggaattgggggaagaagcaggacgg
tcaacaatgtgttcctgtagtctgtacccccacccacatccatacccccatcctcatagt
cggtctcaaacctctcactccaagagaggatcctcagcgcattcccatagccaagaagag
cttattccccactgccacagctttagcgggggttcccatcctaagtctctgccttccaaa
ccagattctagtcaggccaaatcaggcagccagtctaacctcagcctcagcacacaaccc
acagatcacccaccaccacccacaccatcatcaccacaacaggccacctctctcccaatg
ccaattcctcctcctccttcctcatcttccatctcaccaccagcaggggtagggatagca
ggacaggctcaggcttcagccagtgccaaactccagtatcaaagactgcgctctgtgcca
cagccacggaggttctactctccccacctgccactcaaagccaagagcttgtgctcacgc
cgaggatcggcccacttttccagcctggaaagtgaggtatga
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integrated database retrieval system
