Oryzias melastigma (Indian medaka): 112143435
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Entry
112143435 CDS
T07439
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112143435
04082 Neuroactive ligand signaling
112143435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112143435
Ion channels [BR:
oml04040
]
Ligand-gated channels
Glutamate (ionotropic)
112143435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
112143435
NCBI-ProteinID:
XP_024123160
Ensembl:
ENSOMEG00000018771
LinkDB
All DBs
Position
LG16:complement(3255125..3393491)
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AA seq
918 aa
AA seq
DB search
MRNTSLSRRSAITEYWTSLIACLFWIQYSYGMPHVIRIGGIFEQTDGPVSLVSAEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYAILDLVQYLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDTEDTRPLLKEMKRGREFRIIFDCSHHMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAINLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSM
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MSYIKESHWDGLTGRLSFNKTTGLRTDFDLDIVSLKEDGLEKVGKWSASGGLNITEVPKR
KGINITDSLANRSLVITTILEEPYVMLKKSDRALVGNDRFEGFCIDLLKELAGLLGFTYE
IRLVPDGKYGSQDDKGQWNGMIRELIEHRADLAVAPLTITYTREKFIDFSKPFMSMGISI
LYRKPNSTNSGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMDTPVDSADDIAKQTKIEYGVIKDGATMSFFKKSRVSTFEKMWAFMSSRPRTSLVKS
IEDGIQRVLKSDYALITESTTIDYITRRNCNLTQVGGIIDSKGYGIGTPIGSPYRDKITI
AILSILEDGRLHMLKEKWWSGSSCLDEERRETGPMGIQNLGGLFIVLASGLVLSVFVAMA
EFIYKLRKTAEREQRSLCSAMVDEIRLSFTCERRVKHKPQPPVMVKTDAVINMHAYNDRR
LPGKDNMSCSTGMTPVFP
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatacttcgctgtctcgccggagtgcgattacggaatattggacatcgctgatt
gcatgcctcttttggattcagtactcttatgggatgcctcacgttatacgaataggtgga
atattcgaacaaacggatggacctgtttctcttgttagcgcggaggagcttgcctttaaa
tttgctgtcaacaatataaacagaaacagaactttgttgccaaacacaacattaacatat
gacatacagaggattaatatctatgacagctttgaagcatcaagaaaagcttgcgaccag
ctctccttaggagttgttgcaatatttgggccttcgcacagctcctcatcaaacgctgtg
cagtccatctgcaacgccctggaagtgccgcacattcaggtgcggtggaagcaccatccc
atggataacagggacaccttttatgccaatttataccctgattactcatcgttaagctat
gccatcctggacctggtgcagtatctcaaatggaaaacagccactgttgtatatgatgat
agtacaggtcttataagactacaggagctgattatggcaccatccaggtacaacattcga
ctaaagatccgccagcttcctctcgacacggaggatacaaggcccctccttaaagaaatg
aagagaggacgagagtttcgcatcatttttgactgcagtcaccacatggcagctcagatt
ctgaaacaggcccagaccatggggatgatgacggagtattaccactatatcttcaccact
ctggacctgatggccattaacctggagccctatcgcttctgtggcgtaaacatgaccggc
ttccgcatcctcaacgtggataatcctcaggtcgcatccatcgttgagaaatggtctatg
gagaggcagataccacccaaacctgattcaggcctgctggagggaatcatgacgacagat
gcagctttgacctatgatgcagtccacattgtgtccgtgtcctaccagcacgctccacag
atgactgtgaactctctgcagtgccatcgccacaaaccctggagatttgggggccgcttc
atgagctacataaaagagtcccactgggatggtttgactgggaggctttccttcaacaag
acaactggtctgcgcacagactttgatctggacattgtcagcctgaaagaagatggcctt
gaaaaggtggggaaatggagtgcgtctggaggtcttaacatcaccgaagtaccgaagcga
aaaggcattaacatcaccgattccctggctaaccgctcccttgtcattaccaccattctg
gaggagccatatgtcatgcttaagaagtctgacagggcgcttgttggaaacgaccgtttt
gaaggattctgcatcgacttgctgaaagagttggccggcctccttggcttcacgtatgag
atccgtctggtgcctgatgggaaatacggctctcaggatgacaaaggccagtggaacggc
atgataagggagctgattgaacatagagcagatttggctgtggctcctctcaccataacc
tacacacgggagaagttcatcgacttctccaaacccttcatgagcatgggcatcagcatc
ctgtatcgcaagcccaactccaccaacagcggcttcttctccttcctgaaccccatgact
ccagacatttgggtctacatcctgctggcgtacctcggagttagctgtgtcctttttgtc
attgcaaggtttagcccctatgaatggtacgacgctcatccctgtaatccaggatcagat
gtggtggagaacaacttcaccctcctcaacagcttttggtttggagtcggctccttgatg
caacaaggctcagagttgatgcccaaagccctgtcgaccaggatcattggtgggatctgg
tggttcttcacgctcatcatcatatcgtcctatacagctaatttagccgcttttctcact
gtggaaagaatggacacaccggtcgactcagccgatgatattgccaagcagacaaagatt
gagtacggtgtaatcaaagacggggcaaccatgtctttcttcaagaaatcaagagtttcc
acgtttgagaagatgtgggccttcatgagcagcaggccccgaacttcactggtgaagtca
attgaggacgggatccagagagtgctgaagtcagactatgccctcattacagagtccacc
actattgattacatcactcggagaaactgtaatctgactcaggtgggagggattatcgac
agcaaaggctatggcattggcactcccattggctccccttacagggacaaaatcaccata
gcaatactaagtatcttggaggatgggcgcctacacatgctgaaggagaagtggtggagt
gggagcagctgcttggatgaagagcgtcgcgagacaggccccatgggtatccagaacctg
ggtggtttattcattgtgctggcatctggcctggtgctgtctgtgtttgtggcgatggcg
gaattcatctacaaactgaggaagaccgcggaacgtgagcagaggtctttgtgcagtgcc
atggtggacgagatcagactgtcgttcacctgcgagagacgggtgaaacacaagcctcag
cccccggtcatggtgaagacggatgcggtgataaacatgcacgcctacaacgaccgacga
ctcccaggaaaggacaacatgagctgcagcactgggatgactcctgtgttcccatga
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integrated database retrieval system
