Oryzias melastigma (Indian medaka): 112143439
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Entry
112143439 CDS
T07439
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112143439 (khdc4)
Spliceosome [BR:
oml03041
]
Complex B
Other components
Prp19-related factors
112143439 (khdc4)
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
112143439
NCBI-ProteinID:
XP_024123167
Ensembl:
ENSOMEG00000009796
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Position
LG16:7312333..7318583
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AA seq
627 aa
AA seq
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MSFCGQQNSGRRSKWDQPGPGSGSGGMGESEAAPTGALDAAAAVAAKINAMLVAKGKLKP
SQIGTSGLLDKVVGAGKSAVPPKTKDDLVVAEVEINDVPINCRNLLTRGQTQDEISKVSG
AAVSTRGRYMTTEEKGKALPGDRPLYLHVQGQTRELVDRAVNKIKEIITNGVVKAATASP
SSSSFSSSGAPVTVYHQQNPPPPSLPVMTNQKPHFQSGMHYVQDKVFVGLEHAIAGFPVK
ERVEGVGCSYLQHIQAETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAAK
TLCENLLQTVHAEYSRYLSQMSTMMPAQQGFTQPPVVNGVPPQPPYYPPAGYQSGYPLPV
PPPQPQPVPPPYNVPLPIPPVAPAGVPAQYPVRPPVPVPAPAPIPAHTLAPVPAPTVAPG
PAAILPPTPAPEILPQTLPAVHFLPSAAAPPKAPPPAAPTSQPQKRRFTEEVPDERDSGL
LGYQHGPIHVTNLGAGFSVGSPESSGPPSQSSSGLASERNSRQLMPPPPTMAVNGVRPKT
EEKRVPPAPVEPVVKRLRTGLVAYSGDSSDEEEDQPTSKVSGPGNPGIAPPTSASSGWTP
GYRCPPPLPPRAKTQPQQQPMPFWMAP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttgtggacaacagaatagcgggcgccgtagtaaatgggaccaacccggcccc
gggtcgggctccggtgggatgggggagtccgaggctgcgcccaccggagctctggatgct
gcagccgcggtggccgcaaagatcaacgccatgctggtcgctaaagggaaactcaaaccc
tcccaaataggaacgtcgggactgttggacaaggttgtgggtgctggaaagtctgcagtg
ccaccaaaaaccaaagacgatttggttgtagccgaagttgagatcaacgatgtcccgatc
aactgtcgaaatctcctgacacgcggacaaacgcaggatgagatcagcaaggtgagcgga
gccgcagtttcaaccagaggtcgatacatgacaacggaggaaaaaggcaaagcgcttcca
ggggaccgacctctgtatttgcacgttcaaggacagaccagagagctcgtggacagagcc
gttaataaaattaaggagatcattacaaacggcgtggtgaaagcggctacggcttcaccg
tcctcctcgtctttctcctcgagtggagctccagtcacagtgtaccaccagcagaacccc
cctccaccctcgctgcctgtcatgaccaaccagaaacctcacttccagtcagggatgcat
tacgttcaagataaagtcttcgtggggctggagcacgccatcgcagggtttcctgtcaaa
gagcgagtggagggcgtgggctgttcgtatctgcagcacattcaggctgaaacgggggcc
aaagtcttcctcagagggaaaggatccggctgtttagagccggcttcaggacgggaggcc
tttgagcccatgtacatttacatcagtcatcctaagccagaaggactagcagcagcaaaa
acgttgtgtgaaaaccttcttcagactgtccatgcagagtattcacgttaccttagtcaa
atgagcacgatgatgccagcacagcaaggcttcacacaacccccagtggtgaatggggtt
cctcctcagcccccgtactaccccccagccgggtaccagtcgggctaccccttgcctgtg
cccccgcctcagccccaacctgttcccccaccgtataacgtcccccttcctattcctcca
gtggcaccagcaggtgtgccagctcagtaccccgttcgccctccagtcccggttccagcc
cccgcccccattcccgctcacactttggctccggttccggcccccacggtggctcctgga
cccgcggctattcttcccccaactccggccccagagattctgccacagactcttcctgct
gtccattttctcccctctgctgcagcaccacccaaagctccgcctccagctgctcccacc
agccaaccacagaagagacgcttcacggaggaggttccagatgagagggacagcggcttg
cttggataccagcatggacccattcatgtgactaatttaggtgcaggcttctcagtgggc
agcccagagtcttcaggacccccgtcacagagttcctctggcttggcgagtgagaggaac
agtcggcagctaatgcctccacccccgaccatggctgtgaacggagtccgacccaaaacg
gaggagaagagggtacctccagcccctgtggagcctgtagtgaaaagactgcgaacaggt
ctggtggcgtacagcggcgactcttctgatgaagaggaagaccagcccacctccaaagtc
tcagggccaggtaaccccggcatagctcccccgacctcagcgtcttcagggtggacgccg
ggctaccgctgccctcctccactgcccccccgggccaagacgcaaccacagcagcagccc
atgccgttctggatggcaccgtaa
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