Oryzias melastigma (Indian medaka): 112143533
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Entry
112143533 CDS
T07439
Symbol
rragca
Name
(RefSeq) ras-related GTP binding Ca
KO
K16186
Ras-related GTP-binding protein C/D
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04140
Autophagy - animal
oml04142
Lysosome biogenesis
oml04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112143533 (rragca)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
112143533 (rragca)
04140 Autophagy - animal
112143533 (rragca)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Gtr1_RagA
Arf
Roc
SRPRB
GTP_EFTU
MMR_HSR1
Ras
AAA_14
Ubiquitin_UBP8
Motif
Other DBs
NCBI-GeneID:
112143533
NCBI-ProteinID:
XP_024123344
Ensembl:
ENSOMEG00000000525
LinkDB
All DBs
Position
LG16:2300828..2313998
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AA seq
382 aa
AA seq
DB search
MSIQYEVEQLPDSYGVADSFPKDFGYGEEEAEIEDSPTSSDSKPRILLMGLRRSGKSSIQ
KVVFHKMSPNETLFLESTNKIYKDDISSSSFVNFQIWDFPGQVDFFDPTFDYEMIFRGTG
ALIFVIDAQDDYVEALGRLHLTVSRAYRVNPEINFEVFIHKVDGLSDDHKIETQRDIHQR
ANDDLADASLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEK
AFLFDVTSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLREDGSGSAYDKESMAII
KLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGVSAQRPGG
SKALGSPCNKAIALNGTPRSTV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcagtacgaggtggaacagctgcctgacagctatggggtggcggactcgttc
cccaaagattttggttatggtgaggaggaggcagaaatcgaggatagcccgacgtcttcc
gatagcaaacctagaatcctgctcatgggtttgagacgaagcggcaagtcatcaatccag
aaggtggttttccataaaatgtcccccaatgagaccttgtttctggagagcaccaacaag
atctacaaggacgacatctccagcagctcttttgtcaacttccagatctgggacttcccc
ggtcaggtggacttctttgaccccaccttcgactacgagatgatctttcgaggaactggg
gctttaatatttgtcatcgacgctcaggatgattacgtggaagctctgggaaggctccac
ctcactgtgtcgcgggcctacagagtcaacccggaaatcaactttgaggtgttcatccac
aaggtggacggcctgtcggacgaccacaagatcgaaacgcagagagacatccatcagaga
gccaacgacgatctggctgatgccagtttggagaagctacatctcagcttttacttgacg
agtatttatgaccactccatctttgaagccttcagcaaagtggtgcagaagctcatccca
cagctccccacgctagagaacctcctcaatatcttcatttctaattcaggaatcgagaag
gcttttctctttgacgtgaccagtaagatctacatcgccacagacagctctccagtggac
atgcagtcgtacgagctgtgctgcgacatgatcgatgtggtcatcgacgtgtcctgcatc
tacggtttaagggaggatgggagcggcagcgcctacgacaaagagtccatggctattatc
aagctcaacaacaccactgtgctgtacctcaaagaggtcaccaagttcctggccctcgtc
tgcatcctacgagaggagagcttcgagcgcaaaggattaatagactacaactttcactgt
ttccggaaggccatccacgaagtatttgaggtgggcgtttccgctcaacgtccgggtggt
tctaaagcactgggctccccgtgcaacaaggccatcgcactgaatggcacgccacgcagc
actgtctaa
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