Oryzias melastigma (Indian medaka): 112143542
Help
Entry
112143542 CDS
T07439
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
oml03420
Nucleotide excision repair
oml03430
Mismatch repair
oml03440
Homologous recombination
oml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112143542 (rpa2)
03420 Nucleotide excision repair
112143542 (rpa2)
03430 Mismatch repair
112143542 (rpa2)
03440 Homologous recombination
112143542 (rpa2)
03460 Fanconi anemia pathway
112143542 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112143542 (rpa2)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112143542 (rpa2)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
112143542 (rpa2)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
112143542 (rpa2)
MMR (mismatch excision repair)
112143542 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
112143542 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
112143542
NCBI-ProteinID:
XP_024123360
Ensembl:
ENSOMEG00000018424
LinkDB
All DBs
Position
LG16:3658361..3669445
Genome browser
AA seq
279 aa
AA seq
DB search
MPKAPWKKSVRRRNLGVFTETDTAGGYTQSPGGFASPTLLQDKRGKVRSAQIIPCTVSQL
MSATPTDEAYKVGEVNINQVTIVGIIRSTDKSTTFIQYMVDDMTCAPMDVKHWLDTEDPS
VNSNALPPGTYVKVSGNLRIFQNRKSMVAFRIRALEDMNEITSHMLEVVHAHMALSKPQN
TSVGGMMAGSASKAMIGGMGGSYPGANDMVNNGLSANQNQVLSLIRGCPDQQGISIHDLK
QRLGGMSVAVIKQAVEFLSNEGHIFSTIDEDHFKSTDND
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagctccctggaaaaaatcagtgcgtaggcgcaatttaggagtcttcactgag
acggatacagctgggggttacacgcagtcccctggaggctttgcatcacctaccttattg
caagacaaaagagggaaagtccgttccgcacaaattattccctgcacagtgtcccagttg
atgtctgcaacaccgactgatgaagcatataaagtgggagaagtgaatatcaaccaggtc
accattgttggcatcatcagaagcactgacaaatccacgacattcatccagtacatggtt
gacgatatgacatgtgcccctatggatgtgaagcactggttagacacagaggatccaagt
gtgaacagcaatgcgttacctccaggaacatatgttaaagtctctggaaaccttcgcatt
tttcagaaccgcaagtccatggtggcgttcaggatcagagccctggaggacatgaatgaa
atcacctcgcacatgctggaggttgtccatgcacacatggcgctcagcaaacctcagaac
actagtgttggaggaatgatggctgggagcgcatccaaggcaatgattggagggatggga
ggcagctacccgggtgctaacgacatggtcaataatggattgagtgcaaatcaaaatcag
gtgctgagtctaataagaggctgtccagaccaacaaggcatcagcattcatgatctgaag
cagcgacttggtggcatgagtgtcgcagtgattaaacaagccgtggaatttcttagcaac
gagggtcacattttttccaccatcgacgaagaccactttaagtcaaccgacaatgactag
DBGET
integrated database retrieval system
