Oryzias melastigma (Indian medaka): 112143551
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Entry
112143551 CDS
T07439
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112143551 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112143551 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112143551 (taf2)
03036 Chromosome and associated proteins [BR:
oml03036
]
112143551 (taf2)
Peptidases and inhibitors [BR:
oml01002
]
Metallo peptidases
Family M1
112143551 (taf2)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112143551 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
112143551 (taf2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112143551 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
SR-25
CCDC106
Motif
Other DBs
NCBI-GeneID:
112143551
NCBI-ProteinID:
XP_024123376
Ensembl:
ENSOMEG00000010038
UniProt:
A0A3B3BUX5
LinkDB
All DBs
Position
LG16:complement(17145835..17178904)
Genome browser
AA seq
1213 aa
AA seq
DB search
MNRKKDKAFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNDLEAPFIYNDPTLEVCHSESKQRNLNYFSSAYTAAVSAVDPDAGNGELVIKVP
SELWKQGDELKVLKVYIDFSLDQPKGGLHFVVPDVEGSMAERAAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSSYASMSIFSTNLLHSPMIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFTGCKDKDSPTPHL
HFSIKHPHTMSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTYGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAIGALEK
FPTPASRLALTDILEQEQCFYKVRMQACFCLAKIANAMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFISFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRAELIEALTNSLTPAISINNEVRTVDNLNSDVRLILEEITRFLNMEKLLPSFRNTIT
VSCLRAIRQLQRNGHIPSDPSLFTSYAEYGHFVDVRIAALEALVDYTRVERSSAELQWLL
TLVHNDPVHYVRHKILSMLCKNPPFTKMMDSALCNEALVDQLWKLMNSGACHDWRLRCGA
VNFYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGVAVVMDSPASIGIHGVG
MSYAAEDEEPDPISLGVCGVGQPPQGLKRKAETPLGSPPEPGQVLQQQDEDGRGGRYKIR
FNTMEEEDIDMETVHDSQAFIHHHLNLLERPSTPGKEPPLMEQALLSMPATPVPSFSKET
ASSSSKHGGDHGHHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDRERDRDTPHAYSNSP
ASGLSLRSPSLSD
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaggacaaagccttcgagagcccgcggccctttaaattgacccaccag
gtggtgtgcatcaacaacatcaacttccagaggaagtcagtcattggctttgtggagctg
accattttccccaccgtggtcaacctcaacaggatcaagctgaacagcaagcagtgtcgc
atctacagagtccgagtcaatgacctggaagctccgttcatctacaacgaccccacgctg
gaggtgtgccacagcgagtccaagcagaggaacctcaactatttctccagtgcctacacg
gctgccgtgagtgctgtggaccccgatgctggaaacggagagctggtcatcaaagttccc
tctgaactctggaaacagggagatgagctgaaggtgttgaaggtgtacatagacttctcc
ctggatcagccgaaaggaggtctgcactttgttgttccagatgtggagggcagtatggca
gagagggctgctcacgttttctcctttggctaccagaactccaccaggttctggttcccc
tgtgtggactcctactcagagctgtgcacgtggaagctggagttcaccgtggatgcgtcc
atggtggctgtatcctgtggagacctggttgaaaccatctacacacatgacatgaggaag
aaaaccttccattatgtacttcccattcccacagcggctcccaacatctcactggctgtg
ggtccctttgagatcctggtggacccctacatgcacgaggtcacccatttctgcctgccg
cagctgcttcctcttctcaaacactccatgtcctacttgcatgagatctttgagttctac
gaggagatcctgacgtgccgctacccttactcctgtttcaaaaccgtctttgtggatgaa
gcctacgtccaggtgtcttcctatgcctccatgagcatcttcagcaccaacctgctgcac
agccccatgatcattgaccagaccccgctgactcgccgctgtctggcccaggccctggct
cagcagttctttggctgtttcatctccagaatgtcatgggcggacgagtgggtgctgaag
ggcatctctggttatatctacggcctgtacctgaagaagacctttggagtaaacgaatat
cgacattggatcaaagaggagctggacaagattgttgagtacgagctgaaaatgggaggt
gtgctgctgcaccccaccttcactggatgcaaagacaaggacagtcccaccccccacctg
cacttctccattaagcacccccacaccatgtcttgggagtactacaagatgttccagtgc
aaagctcacctggtgatgaggctgatagaaaaccgaatcagcatggagttcatgctgcag
gtcttcaacaaactgctgagcctggccagcacggcgtcatcgcagaagtaccagagccac
atgtggagccagatgctgctatccacttatggcttcctcaagtccatctccaacgtctct
ggcaaagacatcgggcccctcatcaagcaatgggtagaccagagcggtgtggtgaagttc
tttggcagctttgcctttaacaggaagagaaacgttctggaactggagatccgacaggac
tacacatcgtctgggactcagaaatatgtgggtccgatcaaggtgacggtacaagaactg
gacggttctttcaaccacacgctgcagatagaggaaaacagcctcaaacatgacatccct
tgtcattcaaaaagtagaaggaacaagaaaaagaagatccctctgatgaatggtgaagaa
gtggacatggatttatctgccatggatgccgactcccctctcctttggatccggatcgac
cctgacatgtccatcctgaggaaggtggagtttgagcaggcagacttcatgtggcagtat
cagctgcgctatgagagggacgtggttgcacaggaggaggccatcggtgctttggagaag
tttccgactcccgcctccagactggctctgacggacatcctggagcaggagcagtgcttc
tacaaagttcgcatgcaggcctgcttttgtttggccaagattgccaacgccatggtgagc
acttggcagggcccaccggccatgaagtcgctcttcaccagaatgttctgctgtaagagc
tgccccaacatcgtcaagaccaacaacttcatcagcttccagagctacttcctgcagaag
acgatgccagttgccatggcgctgctgagagatgtacagaacctgtgtcccaaagatgtc
ctcaacttcatacttgacctcatcaagtacaacgacaacaggaagaacaaattctcagat
aactactaccgagctgagctgattgaagccctcaccaactccctgacccccgccatcagc
atcaacaatgaggtgcgaacagtggacaacctgaactcggacgtgcgcctcatcctggag
gagatcacccgctttctgaacatggagaaactgctgccgagcttcaggaacaccatcact
gtcagctgcctcagagccatccggcagctgcagaggaacggacacatccccagcgacccg
tctctcttcacatcatatgctgagtacgggcactttgtggacgttcgcatcgctgctctg
gaggctctggtagactacactcgagtggaaaggagctcagcagagctgcagtggctgctc
actctggttcacaatgatccagttcactatgtcaggcataagatcttgagcatgctctgt
aagaacccgccgttcactaagatgatggactcggctctgtgtaatgaggctctggtggat
cagctgtggaagctcatgaactcaggtgcctgtcatgactggcggttgcgttgtggcgcc
gtgaatttctactacactctgtttggtctgacccggccttcatgcctgcctctgccggag
ctgggcctggtcctcaacctgaaggagaagaaagcggtcctcaatcccactattaagcca
gagcttggtgtggctgtggtcatggactctccagccagcatagggatccacggcgtgggc
atgagctatgcagctgaggatgaggaaccagatcccatttctctgggggtgtgtggggtg
ggccagcccccacagggcctgaagaggaaggcggagacccccctgggctcccccccagag
ccagggcaggtgctgcagcagcaggatgaggatggaagaggaggacgctacaagatcagg
ttcaacacgatggaggaagaagacattgatatggagacggttcatgacagccaggccttc
attcaccatcatctaaacttgctagagaggccttctacaccaggcaaagagcccccgctc
atggagcaggcgctgctctccatgcctgccaccccggtgccctccttctccaaggagacg
gcctcctcctcgtctaagcacggaggcgaccacggccatcaccaccaccaccaccaccat
gagcacaagaagaagaagaagaagcacaagcacaaacacaaacacaagcacaagcatgac
agcaaggacaaagacagagagcgggaccgcgacaccccccacgcctacagcaacagccca
gctagcggcctgtcgctgcgctcgccgtctctgtccgactga
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integrated database retrieval system
