Oryzias melastigma (Indian medaka): 112143582
Help
Entry
112143582 CDS
T07439
Name
(RefSeq) RNA-binding protein 12B isoform X2
KO
K24526
RNA-binding protein 12
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112143582
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112143582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF7614
Motif
Other DBs
NCBI-GeneID:
112143582
NCBI-ProteinID:
XP_024123418
Ensembl:
ENSOMEG00000022523
LinkDB
All DBs
Position
LG16:complement(9813749..9822737)
Genome browser
AA seq
638 aa
AA seq
DB search
MAVVIRLQGLRVTAGSEDIRKFFTGLKIPDGGVHIIGGEQEEAFIIFASDEDARRAMTRS
GGVIRGSPVTLLLSSKTEMQNVLERTTQIVELDQKRQNEANEPYAGRSADPKVDRRSSGR
TEFSPPIDRKRDMDTERYFVVFLNGLPFSVTENEICEFFKGLETDEIVLLKNHRGQNNGK
AFVRFVSVEDALEGLKRNREYIGTRYVEVCTTTVNEWYRATGRMPMGVNMDDNFERGRMP
DHSQRTPQHARSRSPMMQRHALASEEEYCVLLDNLSYGMEKDDIKQMFRNAKLDNDQILY
LTDGEGKRTRSAFVLFKSFHDYSDAISNEKKLLYNRWVNVQPISRENMLSLLQSQNTAVR
PPENNQSYQERPPSHPRDSYESEKACVFVRNLPFDVRKVEIMDFFHGFNVSESRVSVLHG
PKGAGVGQAVVLFESEAAAMEALCLNGQRFLGSEVILKCISRFQMKQLTTEPQMRQEPPS
REEWYPGRRSRSSEPSFRPDNALYSDFRNPRDGILPQGNAQSHMHRGSDYEPPAVKPRPS
RDWGNGAHGSFGSPVQHFDGPTCVQLVNLPFQIKSEEIYDFCYGYRIIPGSVSLQYDQGG
KPKGSATLVFESRQEALTALRELNGRPIGPRKIELILL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtcatccgtttacagggactgagagtcaccgcaggttccgaggatattcga
aagttcttcactggcctcaaaattccagatggaggggtccatataattggtggggagcaa
gaggaagcgttcataattttcgcttcagatgaagatgcaagaagagccatgacacgctca
gggggtgtcattaggggctcacctgtgaccctgctgctgagtagtaaaacggagatgcag
aatgtgcttgaaagaacaacacaaatcgttgagctggatcagaagaggcaaaatgaggca
aatgaaccatatgcagggagatctgctgatcctaaagtggaccggaggtcaagtggtcgc
acagaatttagtcctcccattgaccgtaaaagggacatggacacagaaagatattttgtg
gtgtttctaaatggactgccgttctctgtgaccgaaaatgaaatctgcgagtttttcaag
ggtttagagacagatgagattgtgttgctgaagaaccacagagggcaaaacaacggaaaa
gcctttgtccggttcgtatcagtggaagacgcactggaaggcttgaaaaggaatagggaa
tacatcgggacgaggtatgtggaggtctgcacaacaacggtcaacgagtggtatcgtgcg
actggtagaatgccgatgggtgtcaacatggacgataattttgaaagagggagaatgcct
gatcacagtcaaagaaccccacagcatgcacgctcacgatcccccatgatgcaacggcat
gcgctcgcttcggaagaagagtactgcgttctgttggacaacctgtcctacggtatggaa
aaagacgatataaagcaaatgtttcgcaacgcaaagctcgacaatgaccagatcttgtac
ttaactgatggtgaggggaaaaggacaagatctgcgtttgtgctgttcaagagtttccac
gactacagcgacgccataagcaatgagaaaaaactgctttacaaccgatgggtgaacgtc
caacccatctccagagagaacatgttgtctcttctgcagtcacagaatacggctgtaaga
cctcctgaaaacaaccagagctatcaagagagacctccatcacaccccagggattcctat
gagtctgaaaaagcctgcgtgtttgtgagaaaccttccatttgatgtcagaaaagttgaa
ataatggacttctttcatgggtttaacgtctcagagagcagagtgtcggtgcttcatggc
cctaaaggtgctggtgttggacaggctgtggtcctttttgagtctgaggcagcggccatg
gaagcgctctgtcttaacgggcaaaggtttcttgggtctgaagtcatcctgaagtgcatt
tcacgttttcaaatgaagcagctgacaactgagccacaaatgcgacaagaaccgccatca
agggaggagtggtacccaggcaggcgcagcaggagcagcgaaccatcttttcgcccagat
aacgctttgtactctgactttaggaatcccagggatggtattttgcctcaagggaatgcg
cagagccacatgcacagaggcagtgattacgaaccacctgctgtgaaacctcggccgtca
cgagactggggtaatggagcccatggtagttttggctcccctgtgcagcactttgatggt
cccacgtgtgtgcagttggtcaacttgcccttccagatcaagagtgaagaaatctatgac
ttctgttatggataccgtatcatacctggatctgtctcacttcagtatgaccagggtgga
aaacctaaaggctctgccacgttggtgtttgagtctcgccaggaggccttaactgctctt
cgggaattaaatggacgaccaattggaccgagaaagattgagctcatacttctgtag
DBGET
integrated database retrieval system
