Oryzias melastigma (Indian medaka): 112143638
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Entry
112143638 CDS
T07439
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oml04054
]
112143638 (tlr21)
Pattern recognition receptors [BR:
oml04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
112143638 (tlr21)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
112143638
NCBI-ProteinID:
XP_024123526
Ensembl:
ENSOMEG00000016214
UniProt:
A0A3B3DN82
LinkDB
All DBs
Position
LG16:4913065..4916885
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AA seq
979 aa
AA seq
DB search
MAFLTRKLLALTVVLGVVQLVVGYSYRNCIEDQWSQRKSFHCTRRYFGNMSYMTQDLPVT
AVNLTISHCNVSRIDDSLSHLSNLQHLSISPCNLRIIDMKAFQKLSKLKTLDLSFNELSE
LKPLLFEDLHNLHSLLLAHNKLRALPEEVFLNTLGLETLNMGTNLLTNFFNVAKSVSHLM
NLTVLDLSFNHFTSLSYSNVSLPRSLTKLSLSGNNLLTLGCQATLFNYVKLLDLSNNTKL
TAKAFQGVDLSHLNSLRLQLTNVDILKFLNISNVSGVHVDFSGTGLKNKTQIEKLCELLK
KKHSIIKNLRLDYNGIRSTSFALHYCPTITKALDLSHNNLKTIKCLGFLDGQEKITELYA
EHNHLTSLLPCKNKSKPALNKLEKLSYRYNRILSVSADAFHLTPNIKTLQLNINSIAFFD
HHALKGLKKLHELRLDNNLLTDLFNDTFANTYNLKILNLRNNRISVIFNGTFHYLKKLTI
LDLGGNKITQFQAGGFDGLTNLSKLYLDGNNLKQIDTSFYYAFQDTLQVLDLNSNKIRFL
RDDKSSPFMNFSKLTDLKLGSQRPHGLTILPRTLFRGLHSLKSLYLTNNKISHIPHDAFD
DLTGLHFLTLDNCCVGRVNLQPGVFKNLRNLTKLVIENMGLQSFTREVFGNLTQLRILQA
NHNAMQSIPVDVLESLTKLQYLDIRNVSLSCTCENILLQNYTLHNPDLQVIYLYNLQCPE
DKRRTFFNFNTEVCFIDLEKYLFFCTAVVIFLFTVTPLLHIKLYWKVKYGYYVFRAWFSD
HWSRIRDKEENCQYDAFISYNSSDEEWVMDYLVPNLEGNKSPFKLCLHHRDFELGRDIVD
NIVNAVYSSRKTVCVVSRSFLCSEWCSLEIQLASYRLFDEHRDVLLLVFLEPISERQLSS
YHRMRKVMLKKTYLQWPGPDTTNLLQAQELFWSQLRRAIRAGNRLETEDGIQESYAATDD
QTEKPCEDQTPDENCPLLV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggctttcctgactcgcaagcttttggcacttacggttgtccttggtgtggttcaactc
gtcgttggctacagctatagaaactgtattgaggatcagtggtcacagcggaaaagcttc
cactgtaccaggaggtactttgggaacatgtcttacatgacacaggacctgccggtgact
gctgtcaatctcaccatcagtcattgcaatgtgagtcgcattgacgacagcttgtctcat
ctatcaaaccttcagcacctgagtataagcccttgtaacctgaggatcatcgacatgaaa
gctttccaaaaattgagtaaacttaaaactttagatctgtccttcaacgaattgtctgag
ctcaaacctttgttgtttgaggatctgcacaacctccactccctcttgttggctcacaac
aaactacgagctctccctgaggaggttttcttaaacactctaggtcttgagactttaaac
atggggacaaacctgctcaccaatttctttaatgttgccaaatctgtatcgcatctgatg
aatctgacggttttggacctcagcttcaatcatttcacctctttgagttactctaatgtg
tctttgcccagatccctcacaaaactctctctgagtggaaacaatttgctcacattagga
tgtcaagcgacattgtttaattacgtcaagcttctggatctgtcgaacaacaccaagctc
actgcgaaggcttttcaaggagttgatttgagtcacttaaactcattgcgtttgcaattg
acgaatgtggacatactgaagttcttaaatatcagcaatgtgagtggagtacacgtcgac
ttctctggcactggtttgaagaataaaactcaaatcgagaaactctgcgaactactaaag
aaaaagcacagcatcataaaaaatttgagattggattataatgggattagaagtacatca
tttgcactccactattgccctacaattacaaaggctttagatttatcccataacaacctg
aaaaccataaagtgcctcggctttcttgatggacaagaaaagatcacagagctctatgca
gagcacaaccatctcacatccctgttaccctgcaaaaacaaaagcaaacctgctttgaat
aaactggaaaagttgagttaccgctacaatcgtatcctctcagtgagcgcagacgctttt
catctcactccaaacataaagacgctgcaacttaacataaatagtattgcattttttgac
caccatgccctgaaaggcttaaaaaagctacatgagctacggctggataataatctctta
acggatctgttcaatgacacctttgcaaatacttacaacctgaaaatccttaatctgcgc
aacaatcgcatttctgtcatatttaacgggacattccactacctcaaaaagttaacaatc
ttggatctgggaggcaataagatcactcaattccaggcaggcggctttgatggcttaaca
aatctgtcaaagctctacttggacggaaacaacctaaaacagattgacacctctttctat
tacgcattccaggatactctccaagtcctggatttaaatagtaacaagatccgatttttg
agggacgacaaaagctcccctttcatgaacttcagcaaactcaccgatctcaaactgggg
tcgcagcggcctcacggtctcaccattttacctcgcactttattccgaggcctgcactca
ctgaagtctttgtacctcaccaacaacaaaatctcccacattcctcatgatgcctttgat
gatttgactggcttacattttctcaccctggataactgctgcgttgggagggtgaacttg
caaccaggagtctttaagaatctaagaaacttgaccaaactagtcatagaaaatatgggc
cttcaaagtttcacccgggaggtttttgggaacctcacacagctgaggatccttcaggca
aaccacaacgcgatgcagagcattcctgtagacgtcctggagagtttaaccaaactccaa
tacctcgacatccgtaatgtttctctgagctgcacctgtgagaacatcttattgcaaaac
tacacccttcacaaccccgatctccaggtaatctatctgtacaaccttcagtgtccggag
gataaaagaaggacattctttaactttaacactgaagtttgtttcatagatttagaaaag
tacctgttcttctgcactgcagttgtgatcttcctgtttacagtcactccactacttcat
atcaaactctactggaaagtcaagtatggatactatgttttccgcgcctggttcagtgac
cattggagtagaatcagagacaaagaggagaattgccaatatgacgcattcatctcctac
aactcctcagatgaggagtgggtcatggattatttggtgcctaaccttgaggggaataaa
tccccctttaagctctgtctgcatcacagagacttcgaattgggtcgagacatcgtggac
aacatagtcaacgcagtttacagcagcaggaaaactgtttgtgtggtgagcaggagcttc
ctgtgcagtgagtggtgttccctggagattcagctcgccagttacagactctttgatgag
cacagagacgttctcctgctcgtcttcctggagccgatctcagagaggcagctgtcatcc
taccaccgcatgaggaaggtcatgctaaaaaagacgtatctacagtggcccggtccggac
accactaatcttctgcaagcccaagagctgttttggagtcagctccggagggcaataagg
gcagggaacaggctggaaacagaagatggaatccaggaatcctatgcagccacggatgat
caaactgagaagccttgtgaggatcagacaccagatgagaactgtcccttgctagtataa
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