Oryzias melastigma (Indian medaka): 112143646
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Entry
112143646 CDS
T07439
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112143646 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112143646 (pou2f2a)
03021 Transcription machinery [BR:
oml03021
]
112143646 (pou2f2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112143646 (pou2f2a)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
112143646 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Com_YlbF
Homeobox_KN
C2orf69
Motif
Other DBs
NCBI-GeneID:
112143646
NCBI-ProteinID:
XP_024123542
Ensembl:
ENSOMEG00000015477
LinkDB
All DBs
Position
LG16:complement(5401696..5448776)
Genome browser
AA seq
740 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNAWRLKSPLAPRSNSDIMMSKPVEVEKVGADSPMEGADLERN
GSELNHQAQSMKVGSFPLSPNLSSSKNKMDECTEMSPGLSPSHGPTPQQTALQHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAARAAAQANQQAQAAAAAN
QQAQQQQQAGQQAHSQSQGQSTQEESSQSVPVPPPPPPQLTLSQPIQLTAQDIQQLLHLQ
QLVFVPGHPLQSQFLLPQAQQCQQGLLSTPNLIPLPQQNQGSLLSAPTRMGLQPQRDKTA
DVSASGGVTMAPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSPSLGFEGVPGR
RRKKRTSIETNVRVALERSFLTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRIN
PTSATPPLPSQPPTAPQVHKPPCYSPHMMSSQLSQAVTTLSSTTVTTMSPVCPLTSSLTS
THPSLSSAHPPLSSAPSPATPPPPPRSTASPATPSHSTLNLNTGLWRMGKKNGEMSNYIT
DFAANLRNNVMGVNTGMNQALLGNNPLATIQALAASGGQLPLSTLEGASKAIVGASGGQG
GTLASSLFLNHPTLLHLGQNPGAGLASGAVAKVSQASPFPSASSISPTPCSPSPCSSPAS
SCLSSEMGHSPPSLGGAKIE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccttgccggtgccgttcgtgtttcaaagaactgcccctgacctcaacgcc
tggcgcctcaagtcccctctggctccccgctccaactccgatatcatgatgtcaaagcca
gtggaggttgagaaggtcggggccgactccccgatggagggcgcggatttagagcggaat
ggatctgaattaaatcaccaggctcagtccatgaaggtcggctcctttcccctgtcccca
aacctgagcagcagcaagaacaaaatggacgagtgcactgaaatgtccccaggcctgtcc
ccctcccacggcccgacccctcagcagacggccctgcaacacacacagctcatgctgacc
ggctcccagcttgcagggttgacagccctgctgccagcacagcagcagttgcttttgcag
caggctcaggcgcaactcctggctgccgctgtgcagcagtccaatgcagcccatgcggcc
cacgctgcccgtgcagctgcccaggccaatcagcaagctcaagcagctgcagcagcaaat
cagcaggcccagcagcagcagcaagcaggccagcaggctcactcgcagtcccagggacag
agcacacaggaagagagcagccaaagtgtccccgtcccacctcctcctccaccccagctc
accctctcccaaccaatccagctgaccgcccaggacattcagcagttgctgcatctccag
cagttggtgtttgtgccgggtcatcctctccagtcccagtttctcctcccacaggcacag
cagtgtcaacaaggactcctgtcaacaccaaatcttataccgctacctcagcaaaaccaa
gggagcctcctttctgcaccgacgagaatgggactccagccacagcgagataagacggca
gatgtgagtgctagtggaggtgtgaccatggcgccctcggtgacctcccaccccgaggag
cccagcgacctggaggagctggaacagttcgcccgcactttcaagcagagacgcatcaaa
ctgggcttcacacagggagacgtgggtttggccatggggaagctgtacggcaatgacttc
agtcagaccaccatctctcgctttgaagctctcaacttgagctttaagaacatgtgcaag
ctgaagccactgctggagaagtggctcaatgatgcagaaaccatgtctatagacagcacc
ctgcccagccccagctccctgtcctctccctctctgggctttgaaggggttccaggtcgc
cgcaggaagaagagaaccagcatagagacaaacgtccgagtggctctggaaagatcgttt
ctgacgaaccagaagcctacctctgaggagatcctgctgatcgcagagcagctcaacatg
gagaaggaggtgatccgagtctggttctgcaaccgccggcaaaaagagaagcgcatcaac
ccaaccagtgccacccctcccttgcccagccagccccccactgccccacaagtgcacaaa
ccgccctgctacagccctcacatgatgtccagccagctgtcccaggccgtgaccactctc
agcagcacaacggtgaccaccatgtcccccgtctgccccctgacctccagcctcacctcc
acccacccctctctcagctccgcccacccccctctcagctccgcaccatccccggcgact
cctccacctcctccccgcagcacggccagccccgccactcccagccacagcacactgaac
cttaacacgggtttatggcgtatgggtaaaaagaacggtgaaatgtctaactacatcacc
gattttgctgcaaacttgaggaacaatgtgatgggagttaacacggggatgaaccaagcc
ctcctcggtaacaatcccctggctactatccaagctctagcagccagtggtggccagctg
cctctttccactcttgagggtgccagcaaggcgatagtgggggcctctgggggtcaagga
ggcaccctggcttcttcccttttcctcaaccaccccaccttgctccacttgggccagaac
cccggcgctggactggccagcggtgctgtagccaaagtttcccaggcctcacccttccct
tcagccagcagcatcagccccacgccctgctccccctctccctgctccagccccgcctcc
tcatgcttgtccagcgaaatgggccacagcccaccatccctgggcggagccaagattgag
tga
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