Oryzias melastigma (Indian medaka): 112143653
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Entry
112143653 CDS
T07439
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112143653 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112143653 (pex5)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112143653 (pex5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_14
TPR_16
TPR_19
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_12
CFAP70_TPR_C
RMD1-3
TPR_20
TPR_Slam
ANAPC3
TPR_9
TPR_10
PEX18_PEX21_C
CABIN1_N
Secretin_N_2
Motif
Other DBs
NCBI-GeneID:
112143653
NCBI-ProteinID:
XP_024123555
Ensembl:
ENSOMEG00000013891
LinkDB
All DBs
Position
LG16:complement(5962567..5973675)
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AA seq
642 aa
AA seq
DB search
MAMRELVEAECGGANPLMKLASHMTKEEGTWQHRTSPAIPPTPIEIATEQELVNEFLQAP
PRPPTTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWAAEFLSSSDSATTPGLT
SLGDAADSDWTREFIAEAADPGRWAEEYLEQSEEKLWLGDLGDKESEWTKEYQSGDELRQ
TANELVAKVDDPKLKNTEFLKFIRQIGEGSVTVESRADKQLTDKAQAEEAQNWASNLNQV
SEESAEAWVDEFATTGPDFHQAKAAVESDVDFWEKLQQEWEEMAKRDAESHPWLSDFDQL
LSTSYDKGYQFEEDNPYLSHPDPLSEGVKRMEAGDIPGAVRFFESAVQKEPDNQLAWQYL
GTCQAENEQEFAAISALRRCIDLKKDNLTALMALAVSFTNESLHRQACETLRDWLKHNPK
YRSVWEQHERERQKDGPGNREKESERFGSLLPESLFTDVQSMFLRAANSDPTQVDPQLQC
GLGVLFNLSGEYDKAVDCFSAALSVTPQDYLLWNKLGATLANGNRSEEAVAAYRRALELQ
PGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAAGDGVRAPQGPGGITGTVMSDNI
WSTLRMALSMMGESSLYAAADRRDLDMLLAHFSQRDVDGGTE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgagaattggttgaggccgaatgtggtggagccaatcccctcatgaagttg
gccagtcacatgaccaaggaagaggggacatggcagcaccgcaccagccctgcaattcca
ccaactccaattgaaattgcaactgaacaagagctggtgaatgagttccttcaggcccct
ccacgaccccccaccacatttgacatgggtcagctattggaggaaatgcagcagatcgat
cagcaaagctacagacaagctccacagagagctcctgatgtggccgcactggccctctct
ggtgattgggctgccgagttcctctccagttcagattctgcaaccacaccaggtctcacc
tctctgggtgatgcagcagattctgattggaccagagaatttattgctgaggctgcagat
cctggtcgctgggcggaggagtacctggagcaatctgaggagaagttgtggctcggagac
cttggagacaaggaaagcgaatggactaaagagtatcagtcaggagatgagctgaggcag
acggcaaatgaacttgttgcaaaggtggatgaccccaagttaaaaaacacagagttcctg
aaattcattaggcagattggcgagggaagtgtgacagtggagagcagagcagacaaacag
ctcacagataaagctcaggccgaggaggctcagaactgggcctccaacctcaaccaggtt
tcagaggagtcagctgaggcatgggtagacgagtttgccacaacagggccggattttcat
caagccaaagctgcagtggagagtgatgtggatttctgggagaagctgcagcaggagtgg
gaggagatggccaagagagatgcagagagccatccctggctgtctgactttgatcagtta
ctcagcacttcttatgacaagggttatcagtttgaagaagataatccttacctgtcccat
ccggaccctttgtcagagggggttaaaaggatggaggcaggggacatacccggagccgtg
cggttctttgaaagtgcggtacagaaggaaccagacaaccagctggcttggcaatatctg
ggcacctgtcaagcagaaaacgagcaggagtttgctgccatcagcgccctccgcaggtgt
atagatcttaagaaggacaatttgacagcgctgatggcgctggctgttagcttcacgaat
gagtcgctgcacaggcaggcctgtgagacgcttcgtgactggttgaagcacaatcctaaa
tatcgctctgtgtgggagcagcacgagcgtgaacgccaaaaagacggccctggaaacagg
gagaaggagagcgagaggttcgggtcccttttgccagaatcactatttactgatgtccag
tctatgttcctacgggcagccaactcagaccccacccaggtggacccacagctgcagtgt
ggcctaggggtcctctttaatctcagtggagaatatgacaaagcggtggactgctttagt
gctgctctctctgtcaccccccaggattatctgctgtggaataagctgggagctactcta
gctaatgggaaccggtcagaagaggctgtagcggcttacaggagagctctggaacttcag
ccaggtttcgtccgcagtcgctataatttgggaatcagctgtgttaacttaggcgcccac
agagaggcagtggagcacttcctggaagctctgtctctgcagcggcaggctgcaggtgac
ggcgtgagagctcctcaggggcctggaggtatcacaggaacagtaatgtccgataacatc
tggtcaaccctgcgcatggctctcagcatgatgggcgagagctctctctacgctgccgct
gaccggcgagacttggacatgctgctggctcatttcagccagagggacgttgatggcggg
acggaatga
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integrated database retrieval system
