Oryzias melastigma (Indian medaka): 112143746
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Entry
112143746 CDS
T07439
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112143746 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112143746 (tmc4)
03037 Cilium and associated proteins [BR:
oml03037
]
112143746 (tmc4)
Transporters [BR:
oml02000
]
Other transporters
Pores ion channels [TC:
1
]
112143746 (tmc4)
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Stereociliary proteins
112143746 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
112143746
NCBI-ProteinID:
XP_024123694
Ensembl:
ENSOMEG00000010490
UniProt:
A0A3B3DD46
LinkDB
All DBs
Position
LG16:7111537..7118701
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AA seq
691 aa
AA seq
DB search
MTSFLNRQDSYQEYDYFPGDAYPGDHHSLRLRRLSSGRSIHNIPHYNPSLSDGGDSEDDN
QGQPRELRSLPRHMAIKKAKLKSRGIQVPVLSKAEMWKQDKLKKLQKLQNKAREILFFLA
LWGKTLQKIGGNFGGGVQSYFLFLRFLVILNFVSFLLMAGFVIIPSLVFRQVGVSFMNSN
STGEEICTVYEPNPPGLVVFYDYFLNLLSGTGFMEYSFMFYGYYNNTMVEDRNFSYKIPL
AYLFTAIFYFAFCLICIVTRMGSAARVAVATGGSTAVNYSMIVFTGWDYGCLGDTATKLK
QKNLLYRLQVDLEEERLKKHAASLTLLQKFGLHSLRLLMFLLVLGLNIAAFFGIFYATRY
SQAQQNQSAGIQALFYEYLPSVVISAGNFLVPLLCDQIAKVERYSPSITVIVALLRAVVL
RFVSLGVLLFTLWDQITCKGKINDLKCMLCGYNYESYPCWETRVGQEMYKLTLFDLLINI
ALLVLVEFPRRMVVDNWSSKISQLVGRQEFVVSSSVLGLVYSQTVVWTGALFCPLLPLIN
TVKFVILFYCKKITLFSNCRPPQKTFRSTTSAFFFLVVLLLGWMLASVVLIYSIAVIRPS
LGCGPFRFSDNMWSVVPKSLYSLPLVTQEFLFFLGSQAFTIPLFSLSSLVMFYVIALFSI
YGKSVRLLRQQLKGESRDKQFLVKQIGELSQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttttctgaacagacaagattcatatcaagaatacgactattttccaggagat
gcatatcctggtgaccatcactcccttagactgcgtcggctttcatctggaaggtccatt
cacaatattcctcattacaacccaagtttgagcgatggaggggacagtgaagacgacaac
caaggccagccgagagaactcaggagcctcccacgacacatggcgatcaaaaaagccaaa
ctgaagagtcggggcatccaggttcccgttctctccaaggcggagatgtggaaacaagat
aagctcaaaaagctgcaaaagctccagaacaaagccagagagattctcttctttttggct
ctctgggggaagacgttgcaaaagattggaggaaactttggaggaggcgtccagtcctac
ttcctgttcctgcggtttttggtcatcctaaactttgtgtcgttcctgctgatggccggg
tttgtcatcatccccagcctcgttttcagacaggtgggggtcagcttcatgaacagcaac
agcacaggtgaagaaatctgcacagtctatgaacccaatcctccaggtctggtggtgttc
tacgattatttccttaatctgctttcaggaacggggtttatggagtattccttcatgttt
tacggttactacaacaacaccatggtggaggacaggaacttctcttataaaatccccttg
gcgtacctttttaccgccatcttctactttgccttttgtctgatttgcattgttacacgc
atgggatctgcagctcgagttgccgtggcaacgggaggcagtaccgcggtgaactacagc
atgattgtgttcactggatgggactacggttgcctgggagacacggcgaccaagttgaag
cagaaaaacctcctctatcgattacaggtggatctggaggaagagcgcttaaagaaacac
gccgcttctctgaccttgctgcagaagttcggcttacactctctccgccttctgatgttt
ctgttggtgctcggcctgaacatagccgccttctttgggatcttttacgccaccagatac
agccaggcccagcagaatcaaagtgcagggatccaagctttattctatgagtacctgccg
tcagtggtcatcagtgctggaaacttcttggtgcctcttttgtgtgaccaaatcgctaaa
gtagagcgttattcccccagcatcactgttatagtagcacttttgagagcagtggttctg
cgttttgtgagtctgggtgtccttcttttcaccttgtgggatcagatcacctgcaagggg
aagataaatgacctgaaatgcatgttgtgtggatacaactatgaaagttatccgtgttgg
gaaactcgagtggggcaggagatgtacaagctgacactgtttgacctcctcataaacatt
gctttgctcgtcctggttgaatttccacgcaggatggtggtcgacaattggtccagtaaa
atatctcagctggtgggccggcaggagtttgttgtttcctccagtgttctgggactggtc
tacagccagacggtggtctggacgggagctctgttttgccctctgctgcccctcatcaac
actgtaaagtttgtcatcctcttttactgcaaaaagataacactgttctccaactgtcgg
ccgccccagaagacgtttcgctccaccacctcagccttctttttcctggtggtcctgctc
ttaggctggatgctggcctcagttgtcttgatttacagtattgctgtgatccgaccttct
ctgggatgtgggcctttccgtttctctgacaacatgtggtcagttgtaccaaagtcttta
tacagcctccctttagtcacacaagagtttcttttcttcctcggctcacaggcgttcaca
attcccctgttttcattatcaagcttggtgatgttctacgtcatagctttgttctctatc
tatgggaaaagtgtaagactgctaagacagcagctcaaaggggagagccgggataagcag
ttcttagtcaagcagattggggagctcagtcagtag
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