Oryzias melastigma (Indian medaka): 112143808
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Entry
112143808 CDS
T07439
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oml03009
]
112143808 (nop2)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
112143808 (nop2)
Ribosome biogenesis [BR:
oml03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112143808 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
112143808
NCBI-ProteinID:
XP_036071791
Ensembl:
ENSOMEG00000012751
LinkDB
All DBs
Position
LG16:complement(6269338..6277222)
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AA seq
659 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKARKQQGAEVELAKFITDEDTGPKRLSSRARKRAAKRADNSQN
LKEVPKKEPKKGTVSIERAAQKEKKQKKLMDLGSEDDDDDEEEEEEEDDDDDDDEKDEQQ
EDADMDEDDTLQTNADEVDRFRLPGPEESEKDGILSQDLKTIYQRIKDNIDVLCNFSAKR
EEGKARGEYISLLKKDLCTYYSYNNFLIEKLMDLFPLSELVDFLEANEIQRPVTIRTNTL
KTRRRDLAQALINRGVNLDPIGKWSKVGLVIYDSSVPIGXTPEYLAGHYMLQGASSFLPV
MALSPQEGELVLDMSSAPGGKTTYIAQLMRNTGVIVANDANSERLKSVVGNVHRLGVTNT
VICNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKEEGDILRSAHLQKELILS
AIDSVNAESPSGGYVVYCTCSITVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTSFKQF
RFHPSLKLTRRFYPHSHNMDGFFVAKLKKFSNVVPTAPAEKEEEKTDTSEATAASSSPKD
PLSKNDKKKGKLEKKDASKAKTKPNGTTFKPSGGNKSNSGPKKAKIAKTDGEAVKEAEVK
KPTAKANDKNEAPTAEKNEGSRFEKKQTKTRKKPTVIKKRLGKNRFKQLKTMLEKQEKE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccaacaaagtgaagagagggcctggtaagaaagccagg
aagcaacagggggcagaggttgagcttgcaaagtttataaccgatgaggatactggacca
aagcgtttgtcaagcagagccaggaaacgagctgcaaagagagcagacaattcccaaaat
cttaaagaagttccaaagaaagagcccaaaaaaggtacagtttcaattgaacgtgcagct
caaaaagagaaaaaacaaaaaaagttaatggatcttggaagtgaagatgacgatgatgat
gaagaggaggaggaggaggaggatgatgatgatgatgatgatgaaaaagatgaacagcaa
gaagatgcagacatggatgaggatgacactttacaaaccaacgcagatgaggtggacaga
ttccggctgccgggtccagaggagagtgagaaagacgggatcctgtctcaggatctgaag
accatctatcagagaataaaggacaacattgatgtgctctgtaacttctctgcaaaaaga
gaggagggcaaagccagaggagagtacatctctctgctcaagaaagatctctgcacctat
tacagctacaacaacttcctcattgaaaagctgatggatctctttcctctctctgagctg
gtcgatttccttgaagccaatgaaattcagagacccgtcacaattcggaccaacacactg
aaaacacgaaggcgggacctcgcacaggctttgattaacaggggggttaacctcgatcca
attggtaaatggtctaaagtggggctggttatctatgactcgtctgttccaataggnnnn
acccctgagtacctggctggtcactacatgctgcagggagcctccagcttcctgcctgtc
atggctctttctccacaggaaggagagttggtgctggacatgagttctgctccaggaggc
aagaccacctacatagcccagctgatgagaaacacaggagttattgttgcaaacgacgcc
aactctgaaagactgaagagtgtggtgggaaacgttcaccgtttgggagtcaccaacact
gtgatctgcaactatgacggcaggcagttcccaaaggtaatgggcgggtttgatcgagtt
ctgcttgacgcaccctgctcgggaacaggagtcatcgccaaagatccagctgtcaagacc
agtaaggaagaaggggatatcctgcgctcggctcatctgcagaaagagctcattctttct
gctattgattcagtcaatgctgagtcaccttcaggaggatacgtagtctactgcacatgc
tcaataacggtagaggagaatgagtgggtggtagactacgctttgaagaaaaggaacgtt
aaattagtccccaccggacttgactttggcaaagaaggctttaccagtttcaaacagttt
cgattccatccgtctctgaaacttacacggagattttacccgcactcccacaacatggat
ggattttttgtagccaagttgaagaagttctccaatgtggttccgactgctcctgcagag
aaagaagaagagaaaacggacacttcagaggctacagcagcctcatcttctcctaaagat
cctttgtccaaaaatgacaagaaaaagggcaaactggaaaagaaagatgcatcaaaggct
aaaaccaaacccaacggaacaacattcaagccgtcaggaggaaacaaatcaaactccggc
cccaaaaaagcaaagatcgctaaaaccgatggagaggctgtgaaggaagcagaggttaag
aagcctacagcgaaggccaacgacaagaacgaagcaccaacagctgagaaaaacgaagga
agccgctttgagaaaaagcagaccaagacaagaaaaaaacccaccgttatcaagaaaaga
ctggggaagaacagattcaagcagctcaagaccatgttggaaaaacaagaaaaagagtga
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