KEGG   Oryzias melastigma (Indian medaka): 112143809
Entry
112143809         CDS       T07439                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
oml04810  Regulation of actin cytoskeleton
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112143809 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112143809 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112143809 (itga10)
   04810 Regulation of actin cytoskeleton
    112143809 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112143809 (itga10)
Cell adhesion molecules [BR:oml04515]
 Integrins
  Integrin alpha subunits
   112143809 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 vWA_SIBA-E
Other DBs
NCBI-GeneID: 112143809
NCBI-ProteinID: XP_024123788
Ensembl: ENSOMEG00000008660
LinkDB
Position
LG16:7725251..7758091
AA seq 1162 aa
MELRSYLWCLEFLILLKELCQCFNIDGDHPRIFTGPEDAQFGFSVLQHESGGEKLMLVGA
PWDGPSNNRRGDVYKCVVGEERNSNCSKVNLGETALRNVSKNLQNSHLGMTLTPDSPDGF
LACAPLWSQECGTSKFSTGICASVSDDLQPRKTISPNTKRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHIGSDQMQVGILQYGEIAVHEWSLKDYQTTKKVVEAAKNISRQEGR
ETRTARAIQMACTEAFSAERGAREGATKVMIVVTDGESHDEDELPDALMECESRNITRYA
IAVLGHYIRRQQDPETFINEIKTIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESSFHLEMSQIGFSTHTLDDGILFGMVGAYDWDGGVLKEGVNGRIVPPREAFESEFP
LELKNHAAYLGYTVSSVVIGNWRTLYVAGAPRFKHKGKVILFDFTNDKGVDIVQAMNGEQ
IGSYFGSEVCGLDIDQDGITDVLLIAAPMFLSSGNKEAGKVYIYSLSGEGFFVPNGTLKS
DKKSQDARFGYALAAAPDLNHDDFSDLVVGAPLEDEHIGAIYIYHGDGIYINNNYKQRIP
GSSLHPSLQYFGRSVSARLDLDGDDLIDLAVGAQGNAVLLSSRSIVQVRVSLSFQPHSIN
VIQKTCQRGGRESACLNATTCFSAVSRSPGSSSNIFDLSVTATLDDRKLSARALFDDSSH
RQTQLSVQAEIGKTLCYILPFHVFDTADYIRPITFSLRFKINNTKTGPVLDEGWKNTINK
SIPFFKDCGEDDVCTPDLVLSAHMDISGTRQKPYVIRSTRRRLAVEVQLQNRLENAYNTS
LKLHYSRNLHFSSLSIREYANFKIECTALGSNSHSCNVSYPVFRSQSKVNLLLEFEFSCT
FLHSRVQIKINASSDSIERQETLGDNSVQLQTFVQYEPELYVSSSSNLNRYEVHPTRTAS
EAIGPEFFTYFRLVSNLELRMYLPTAAAGDSTFMTVTDVFSNNASGVNCSVMSDGAQLKS
GQREVWPLHPEDMMQDEILNCSRSWCTEVVCAVRQLREDVIIRVSRRVHEDFFRKAKYKS
MRIIGAYGLTAQETNLITLGKGTVWGETVLEVLKGRAIPISLWILIGSIIGGLLLLALII
FILWKLGFFTRKHRGEEENHED
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggagctgcgcagttacctgtggtgcttggagtttcttatccttctcaaagagttatgt
cagtgtttcaacatcgatggagaccatccacgaatcttcaccggtccagaggacgctcag
tttggcttctcagtcttacagcacgaatccggtggagaaaaactgatgctagttggcgct
ccctgggacggaccatccaacaacagaagaggagatgtttacaaatgtgtggtgggagag
gagaggaattcaaactgcagtaaagttaatctaggagaaaccgctcttcggaatgtttcc
aaaaaccttcaaaactctcacctggggatgactcttacaccggactcacccgatggcttc
ctggcatgcgcccctctttggtcgcaggagtgcggcacatctaagttcagcactggcatc
tgtgcatctgttagcgacgacctccagccgaggaaaaccatctctccgaatacaaaaagg
tgcgccacttacatggacatcgtgatcgtcctggatggctccaacagtatctacccctgg
tatgaggtccagaactttctcagcaacatcctcagcaagttccatataggctcggaccag
atgcaggtgggtatacttcagtatggggaaatagcagtccacgagtggtctttgaaggac
taccagacaacaaaaaaagtggtggaggccgccaagaacatcagccggcaagagggtcga
gagacacgtactgcacgcgccatccaaatggcctgcacagaagccttcagtgccgagcgt
ggagcgcgggagggggccaccaaggtgatgattgtggtgacagacggagagtcccacgac
gaggacgagcttccagacgctctgatggagtgcgagagccgaaacatcaccagatacgcc
attgccgttttggggcattatatccggagacagcaggacccagagactttcataaatgag
attaaaaccatcgccagtgacccggatgaaaagtatttcttcaatgtgacagatgaagct
gcgctgaacgacattgtggacgcactgggagacagaatattcagtcttgaaggtacactg
ggctacaatgagagctcgttccatctggagatgtcccagattggcttctccacacacaca
ctggatgatgggattctgtttgggatggtgggagcgtatgactgggatggcggggtgctg
aaggaaggggttaatggaagaatcgtgcctcccagagaagcctttgaaagcgagtttccg
ctggagctgaaaaaccatgctgcttatttaggttacacagtgtcctcggtggtcattgga
aactggaggacgctgtatgtagctggagctccccgattcaaacacaaaggcaaagtgatt
ctgtttgatttcacaaatgacaaaggtgtcgatattgtgcaggccatgaatggtgaacag
attggctcttacttcggcagtgaggtgtgtgggctggacatcgatcaggatggcatcact
gatgtgcttctcattgctgctcccatgttcctcagttctgggaacaaggaggccggtaaa
gtctacatctactcactaagtggggagggtttttttgtaccaaacggtaccctgaagtca
gataaaaagtcccaggatgccaggtttggctatgcactggcagctgctcctgatctgaac
catgatgatttctctgacttggtggtcggagcacctttggaggatgagcacataggtgcc
atctatatttatcatggagatgggatttacatcaataacaactacaagcagcggataccg
gggtcatcacttcacccctccctgcagtattttggccgcagtgtgagcgctcgattggac
ttggatggggatgacctcatagatttggcagtgggagcacagggcaatgctgtgctgcta
agttctcgcagtatcgtccaggtccgagtgagcctgtctttccagccacattccatcaac
gtcatccagaagacctgtcagaggggcggcagagaatccgcctgtctgaatgccacgacc
tgcttctccgccgtctcccgctcacctggatccagcagcaacatttttgatttgtcagtg
acggccacattggatgaccggaagctgtcagctcgggctttgtttgatgacagctcccac
cgacaaacccagctttcagtccaagccgagataggaaagacgctctgctatatacttccc
tttcatgtctttgacacagcggattacattcgtcccattaccttctcactacgatttaag
atcaacaacaccaagaccgggcctgtgctggatgagggatggaaaaacactatcaataaa
tctattcccttcttcaaagactgtggggaggatgatgtttgcacaccagatctggttctg
agtgcacacatggacatctctgggactcgacagaagccttatgtgattcgcagcacgcgt
aggcgtctggcagttgaagtgcagcttcagaacagactggagaacgcctacaataccagc
ctgaagctgcactattcacgaaacctgcacttctccagcctgagcattcgggaatatgcc
aactttaagatagagtgcacagcacttggctcaaacagccactcatgtaatgtcagctac
ccagtgtttcgctctcagtcaaaggtgaaccttttgctggagtttgagttcagctgcact
tttttgcacagtcgtgtccagattaagatcaacgcttccagtgacagcatcgaaagacag
gagactttaggggataacagcgtccagctgcaaacttttgttcagtatgagccggagctg
tatgttagtagctcctctaatctgaaccgctatgaggtccaccccactcggacggcatca
gaagcaattgggccagaatttttcacttacttcaggttagtgagtaatctggagctgcgg
atgtatctgcccaccgccgctgcaggagacagcaccttcatgactgtcaccgacgtcttc
tcaaacaatgcttcaggggtgaactgtagtgtcatgagtgatggggcgcagctgaagagc
gggcagagggaagtgtggccccttcatcctgaagacatgatgcaggatgaaatcctgaac
tgcagcaggtcatggtgcacggaggttgtgtgtgcggtgcggcagctcagggaggacgtc
atcattcgagtcagtcgtagagttcatgaggattttttcaggaaagcgaaatataagtca
atgaggataataggtgcctatggcctcacagctcaggagactaacctcatcactctggga
aaaggaaccgtctggggggagactgttctggaggttctgaagggaagagctattcccatc
tcgctctggatcctgattggcagcatcataggcggtttgctgctgctggctcttatcatc
ttcatactttggaagctcggattctttacacgcaagcacagaggagaggaggaaaatcac
gaagactga

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