Oryzias melastigma (Indian medaka): 112143858
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Entry
112143858 CDS
T07439
Symbol
adamtsl4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23369
ADAMTS-like protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112143858 (adamtsl4)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
112143858 (adamtsl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
TSP1_CCN
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
112143858
NCBI-ProteinID:
XP_024123845
Ensembl:
ENSOMEG00000009061
LinkDB
All DBs
Position
LG16:complement(7505347..7555712)
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AA seq
1165 aa
AA seq
DB search
MQLGSLIRLCVLLASVEVTTSSTKAAKRKAAPRRSRQAFEAEPVEGVWSPWGEWSECSQT
CGVGVSQRTRKCLAPPPPPQTRPFSPPNWAGYVPGRSATSPVSPYYHSRYPGQHPSYHSP
LVSANNNAGLPLYVNSPAAAPGQPARSPPFYHPEFPSANQDAASSYRSPYYVPSQGYNQP
PRVFRRPPNPGAERAGAGGSRRSVPTNREVSTSRRPSGIRPGQFGYGKVPFSLSLHRTNR
QARHTVNSTEENIVAEEEQRGGDEEVNQAARDEEETGEISDTKEEPETTTDRPRPHVDPR
SHPHTDHGRSRVASRLPVSRSQPPFNHHHPRFDWSSVTAPPPPVHSFSRSRSSPYASPLH
RQSQAHRDREPHAGFSPQAPPAGNGYPFQHPHASHLGVESGRHGASQVYKCSGPEKEYRR
CFSQVCGGGGALDSRAEQCAAFNAQEFMGRFYNWEPFTEVGEDKQCELTCRPAGYRFYVR
QAERVRDGTPCFNVSTNDVCVEGRCLSEGCDGVLGSSTVINKCGVCGGQDSSCRKVTGSF
QNATVTLGYHKILDIPAGARLINITERRSSPNYLALRSGTGASVVNGRWAVDPPGEYKAG
GTTFTYIRPRAQSEGKEGRGESLRAPGPTTTQLQLYVIFHKDNPGIDYEFYIPVEKKPEK
EKLTERERDPPLEIPRERPRERDSERAPLRSPLTVSIEDPPPASPPISGPSFPSSSSSSS
SSSSSVFSQPSSERWTPERTRQRGSAPNRNARIPPRTDLPPDTQLPFVWRTGGLTHCSAS
CGKGFQHRAVICVNRQTDEEVPERKCDSAAKPVPEEEPCNTHPCPPFWEVSAWSECSVSC
GPGVQQRQLQCRQSFGNRSTMVHPQRCAGLTKPTSTQACQLQLCSHWEVDSDWSTCSVDC
GMGKRTRSVRCVSDQGGVVNDNECNSRVRPQGSEECNMGPCVTNWYFTDWSNTCSAQCGP
GVQKREVVCLTRGGVREGEGGGDCVAEKPSELKACNSGPCVPTLMWFSSPWTKCNVPCGD
GTQRRDIVCVKKMGNDFTVVPAAECAHLEKPVAVQECQMGECQSSWFTTEWSACSRSCGR
GLQVREVRCLTPDRKHSQACDASSKPEQEQACNTIPCGPQVTDKNCRDRRDNCMMVVQAR
MCVYPYYKTACCASCTQSAQRAKRQ
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcggttcgctgatcaggctctgtgtgctgttggcttctgtggaggtcacaacc
tcctcaaccaaagctgccaagaggaaggcggcgccgcgtaggtccagacaagcttttgag
gcggagcctgtggagggggtgtggtccccctggggggagtggtcagaatgttctcaaact
tgcggcgtaggcgtctcacagagaacgaggaagtgcttggcccctcctcctcctcctcag
acccgccccttctccccacccaactgggcagggtatgtccccggacgctctgcgacctca
cccgtgagcccgtactaccattcccgttaccccgggcaacatccgtcgtatcactctccg
ttggtctccgccaataacaatgcgggattgcccctgtatgtgaactcacctgctgctgct
ccaggacagcctgctcgctcacctcccttttatcacccagaatttccctcggccaatcag
gatgcagcttcttcttaccgctctccctactatgtgccttcgcaaggctacaaccagcca
ccgagagtctttaggaggccaccaaacccaggagcagagagagctggagccggcgggagc
agacgctcagtcccgaccaatcgggaggtttctacttcaaggagaccttccgggatccgt
ccaggtcagtttggatacggcaaagttcccttctctctgtccctgcatcggaccaacagg
caggctcgccacacggttaacagcaccgaggagaacatcgtggcagaagaagagcagagg
ggaggagatgaagaagtcaaccaggcggcgagggatgaggaggaaacaggagagatcagt
gacacgaaggaggaacctgaaacaaccactgacaggccccgcccacacgtggacccgaga
tcacacccccacactgaccacggcagaagcagagtcgcgtcccgtctccccgtctcccgc
tcccagccccccttcaaccaccaccaccctcgctttgactggagctcagtcaccgctccc
ccaccgcccgttcactccttctcccgctctcgttcctcaccttatgcctcacctctccac
cgccagagccaagcgcaccgagacagggagccccacgcaggcttcagcccccaggccccg
cccgcaggaaacggctaccctttccagcacccgcatgcgtcgcacctgggggtcgagtcg
ggcagacacggagcttctcaggtgtacaaatgctcagggcctgagaaggagtaccgcaga
tgcttctctcaggtgtgcggaggaggaggagcgctggactccagagcagagcagtgtgcg
gcctttaacgcccaagagttcatgggtcgcttctacaactgggagcctttcactgaggtt
ggtgaggacaaacagtgcgagctgacctgcagacctgctggctatagattctacgtccgt
caggcggagcgagtcagagacgggacgccctgcttcaatgtcagcaccaacgatgtctgt
gtagaaggacgatgtctgtcggagggctgtgacggggtgctgggctccagcactgtgatt
aacaagtgcggagtgtgtggtgggcaggactcgtcttgtcgaaaagtgacgggaagcttc
caaaatgccaccgtcacccttggttaccacaagatcctggacatcccagccggagccaga
ctcattaacatcacggagagacgatccagccccaactacctcgctctgaggagcggcacg
ggggcatcagtggtgaacgggcgctgggccgtggacccgccgggagagtataaggcaggt
ggaaccactttcacctacatccgacccagagcgcaatcggaggggaaggaagggagagga
gaatccctgagggctccaggacccaccacaacacagctgcagctctatgttattttccac
aaagacaacccgggcattgactacgagttctacatccctgtggagaaaaagccagagaag
gaaaagctgacagagagggaacgggatcccccgctggagatacccagagagaggccacgg
gagcgggactcggagagggcaccccttcgcagtcccctgactgtatcaatagaggaccca
cctcctgcttctcctcctatttcgggcccttcttttccctcctcctcctcctcctcctcc
tcctcctcctcgtctgtattttctcaaccgtcttcagagcgctggacacctgagaggacg
cggcaacgaggctcagcgccaaacaggaacgcgcggatccctccccgcactgacctgccc
cccgacactcagctgccgtttgtgtggaggacaggtggcctcacgcactgctctgcctcc
tgtggcaaaggttttcagcatcgagccgtcatctgtgtaaatcgccaaacagatgaagaa
gtcccagagaggaagtgtgactcggcagccaagcctgttcctgaggaggagccgtgcaac
acacacccctgcccaccattctgggaggtcagcgcgtggtcggagtgcagtgtgtcttgc
gggccgggcgtgcagcagcggcagctccagtgcaggcagagctttggaaaccgctccacc
atggtccaccctcagcgctgcgctggtctcaccaaaccaacgtccacacaggcctgccag
ctccagctctgctcccactgggaggtcgactccgactggagcacgtgctcagtagactgc
gggatgggaaaacggaccagaagtgtgcgctgcgtcagtgatcaaggcggtgtggtgaac
gacaacgagtgcaactccagggtccgcccacaaggaagcgaggagtgcaatatgggcccc
tgtgtcaccaactggtacttcaccgactggtccaacacttgctcggcgcagtgtggccct
ggggtgcagaagagagaagtggtgtgcctcacaagaggtggggtcagagaaggggaagga
ggaggggactgcgtcgccgaaaaaccatcagagctgaaggcctgtaacagcggtccctgt
gtgccaacgctcatgtggttcagcagtccttggacaaagtgtaacgttccgtgtggggat
ggaacccagcgccgagacatcgtttgtgtgaagaaaatgggaaatgacttcacagttgtg
cccgccgctgagtgcgctcatctagaaaagcccgtcgcagtccaagagtgccagatggga
gagtgtcagtcatcttggttcacaacagagtggagcgcgtgttcgcgctcctgtgggagg
ggcttgcaggtgagggaggtgcggtgtcttacaccagacagaaagcacagccaagcgtgc
gatgccagcagcaaacccgaacaggagcaggcctgcaacacaataccctgcggcccgcaa
gtcacagataaaaactgcagggacagacgggataactgcatgatggtggtgcaggccaga
atgtgcgtgtacccctactacaaaaccgcctgctgcgcctcctgcacacagagcgctcag
cgggccaagagacaatga
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