Oryzias melastigma (Indian medaka): 112143998
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Entry
112143998 CDS
T07439
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112143998 (rtn1a)
03036 Chromosome and associated proteins [BR:
oml03036
]
112143998 (rtn1a)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112143998 (rtn1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112143998 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
112143998
NCBI-ProteinID:
XP_024124064
Ensembl:
ENSOMEG00000006424
UniProt:
A0A3B3BK61
LinkDB
All DBs
Position
LG22:13163408..13181456
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AA seq
726 aa
AA seq
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MSAQPGEELGSEERWFGDDYDRNGLFGNTSARFDELRHELKPRGGDAVGDLDQQFHPFQD
DGKRPPVAMETASTDDPMSGLFQKPMNDDGDVYTSLLSTQSLTAGREASYLSDDLKSSKP
SSGSSLLDHFSDDTFSFSSNTKTTSNPMDDAPKSYMGSDKTESYNYMDISHGEERYDQQQ
GANLNKISTGHDLLGGYMDKSPDGEEDEEDEEENLGPALGSHSFPYVEEPSDEEPADYRS
FRNLGGTPQTASPVKITLTESQLPAFKAEPQQAPVGGSERENVLSVGLQGVPTVTLSEPE
DDSPASTPNASPTRKDFSSNDMFKAGSERSAASGRSPGSNREHDGSSAESGDSEIELVSE
EPPKTRSNPFAEAPKSKSSSNQPSNPFDNPPVAKVGFGLTGGPAPPTAYSILREEREAEL
DSDLFIESASEESPKREGVSGPKQGVTSPSPLVPTAAAPRSASEAVAPEPTKAERAKQPM
KTEEDRFSKPKPPTAAVPPEVRSEQPHHDDTHKLSNEGKGNLGKPAASFLLKEFSKQKAI
DLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQK
TDEGHPFKAYLEMEIALSQDQISKYADKILLYSNTCMKELRRLFLVQDLIDSLKFAVLMW
LLTYVGALFNGLTLLILVVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIPG
TKRKEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagcccggcgaggagctcggctcggaggagaggtggttcggggacgattac
gacaggaacggcctgttcgggaacacatccgcccgcttcgacgagctgcgtcacgaattg
aagccgagaggtggtgacgctgtgggcgacctggatcaacaatttcatcctttccaggac
gacgggaaaaggcctcccgttgctatggaaactgcctctacagatgaccccatgtctggg
ctgttccagaagcccatgaatgatgacggtgacgtgtacacctcgctgctctctactcag
agcctcacagccggccgggaagcttcttacctgtcggatgacctcaagtcgtcaaagccc
tcctctggctcgtccctcttggatcacttctcagatgacaccttcagcttcagctccaac
accaagacgacttccaacccaatggatgacgcacctaaatcgtacatgggctcagacaaa
acagaatcctacaactacatggatatcagtcacggcgaggagcgatatgaccaacagcag
ggggccaacctaaataagatctcaactggccacgacttactgggtggatacatggataaa
agcccagatggagaagaagacgaggaagacgaagaagaaaacctgggcccagctttgggc
tcccactctttcccttacgtggaggagccatccgacgaagagccggcagactaccgctct
ttccgaaacctgggtggaacccctcagaccgccagcccggtgaagatcaccttgacggag
tcgcagcttccggccttcaaggccgagcctcagcaagctccagtcggcgggtctgagcgt
gaaaatgtcctgagcgtgggcctgcagggcgttcccaccgtgactctgtcagaaccagag
gatgacagccccgcctccacccctaatgcttcaccaacccgtaaagatttttcttccaac
gacatgttcaaggctggatcggagaggtctgcagcttctgggagaagtccaggctcaaac
cgggagcacgacggcagcagcgccgagtctggagattcagagatagagctggtgtctgaa
gagcctcccaagaccagaagcaatccatttgccgaagcacccaaaagcaagagcagctcc
aaccagcccagcaaccctttcgacaaccccccagtcgccaaagtgggatttggccttacc
ggcggcccggctccgcccacagcctacagcatccttagggaggagagagaggccgagctc
gatagcgatctgttcatcgagtctgcgtctgaggagagccccaagagagagggcgttagt
ggccccaaacagggagtcacgtctccttcccctcttgttcccaccgccgctgccccccgc
agtgccagtgaggcagtggccccagagcccaccaaagctgagagggccaagcagccaatg
aaaacggaagaagatcgcttcagcaaacctaagcccccaaccgctgctgtgcccccagag
gtgcgatcagagcaaccccaccacgatgacacgcacaagctcagtaatgagggcaaagga
aacctgggaaagcctgcagcgtcattccttctgaaagaattcagcaaacaaaaagcaatc
gacctcctgtactggaggaacgtgaagcagtccggcgccgtgttcagcagtgtgcttctg
ctcctgttctccctgacccagttcagcgtggtcagtgttggagcgtacttagccctggca
gccctctctgcaaccattagcttcaggatctacaagtctgtgcttcaggccgtgcagaag
accgatgaggggcatccattcaaagcttacctggagatggaaatcgctctatctcaggac
cagattagtaaatacgccgacaaaatcctgctgtactccaacacctgtatgaaggagctc
cgcaggctgttccttgtacaagatctgatcgactctttaaagtttgcagttctgatgtgg
ctgctgacctatgtgggcgcactcttcaacgggctgacactgctcatcttagttgtggtc
tccatgttcaccatgcctgtggtctacgagaaacaccaggcgcagattgatcagtacgtg
ggactaatacggacccaggtcaactcggtggtgggaaagattcaggcaaagattccaggg
acaaagagaaaggaggagtag
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