Oryzias melastigma (Indian medaka): 112144006
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Entry
112144006 CDS
T07439
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00900
Terpenoid backbone biosynthesis
oml01100
Metabolic pathways
Module
oml_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112144006 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oml01006
]
112144006 (fdps)
Enzymes [BR:
oml01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
112144006 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
112144006 (fdps)
Prenyltransferases [BR:
oml01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112144006 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
112144006
NCBI-ProteinID:
XP_024124068
Ensembl:
ENSOMEG00000008297
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Position
LG16:complement(7830005..7836243)
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AA seq
397 aa
AA seq
DB search
MRRLLNCVLHGPKVLQTMWLDVSPFGVKSRPLMLCTSSFQADGISNGTHSKKALLSDSQL
FEAKFDELVTELIERDLKDPGLADALNRHREVLVYNVPGGKKNRGLSVIGSLRELLPPSQ
LTQDVVERALVVGWCIELLQAFFLVADDIMDGSVLRRGQPCWFRKEGVGLDAINDSFFLE
SALYRLLRKYCREQPYYVHLLELFTETTYQTVLGQTLDLMTAPPGDVDLSRFSMEKYKTI
VKYKTAFYSFYLPVAAAMYMAGITNDVEHNHAKEILLEMGEFFQIQDDFLDCYGDPAVTG
KIGTDIQDNKCSWLVVKALEVMSPEQRTVLEACYGRKDDASVEKVKALYKSLQIQTLYHK
YEEESYQRLQKLIARCAVTLPTTVFLNFANKIYKRNK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcttgctaaactgtgtcctccatggacccaaagttctccaaaccatgtggtta
gatgtgtccccgtttggggtgaaaagccgccccctgatgttgtgcacgtcgtccttccag
gcggacggtatttcgaacgggacacacagtaagaaggcgttactgtcagactctcagctg
tttgaagccaaattcgatgagctggtgacggagttgatcgagagagatctaaaggatccg
ggcctggctgatgctctgaacagacacagagaggttttggtttacaatgttcctgggggt
aagaagaacagagggctttctgtgattggctccttgagagaacttctccctccctctcag
ctcacccaggatgttgtggaaagagctctggtggtgggctggtgcatcgagttgcttcag
gcgtttttcctggtggcggacgacatcatggatggatctgtgctacgcagaggacagccg
tgctggttcaggaaggagggagtcgggctggatgccatcaatgattcatttttcttggaa
tcagcactttacaggctacttcgaaaatactgcagagagcagccctactatgtccatttg
ttggagctcttcacagagaccacatatcagacggtgcttggacagactctggacctcatg
actgctccacctggagatgttgacctcagcaggttcagcatggaaaagtataaaaccata
gtgaaatacaagacagctttttactcgttctacctcccagtggcagcagcaatgtacatg
gcaggaattactaatgacgtagagcacaatcacgccaaagaaatcttacttgaaatgggg
gagtttttccaaatacaggatgactttttggactgctacggtgaccctgcagtgactgga
aagattggcacagacatccaggataacaagtgcagctggttggtggtgaaagctctggag
gtcatgtctcctgagcagagaacagttctggaggcttgttacggacgcaaagatgacgcc
agtgtggagaaggtcaaagctctctacaaatctctgcagatacaaaccctctatcacaaa
tacgaagaagagagctatcagcggctgcagaagctcatcgctcgctgcgctgtcaccctt
cccaccacagttttcctaaattttgcaaacaagatatacaaaaggaacaagtga
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