Oryzias melastigma (Indian medaka): 112144029
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Entry
112144029 CDS
T07439
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112144029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112144029
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
112144029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
112144029
NCBI-ProteinID:
XP_024124102
Ensembl:
ENSOMEG00000018185
LinkDB
All DBs
Position
LG16:3831871..3848854
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AA seq
724 aa
AA seq
DB search
MKKPVLQKATEWKDTQKIKHARSGRPSRVASQYQAEHFSWEKYLKETGAIPAPPSCFRQS
LTPPANEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGSCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPPRIFHKQQPPAPEQNSFKV
GMKLEAVDRKNPHYICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCTLTG
DNLQAPGTKVVLPRNPETPTDGGVENSAMNPTPPVGRPPGQRGRKPGRRKVTAPWNQKAS
ALEPQSIQPVKSLEPVKISKKRGPKPGSKIGWAKRAGWLEEAMAGPGRPVTGLGRTRGRL
PTNWMQRIALQQAQEEPIRIPKKRGPKPGSKRKPRVVPNPAPTSPTSSTPEPDTSTVPLD
NATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQQLPDHFGPGRASSVLQQCVQACVDSA
HNQATVFSCLKSGQGGEVISAFFDQQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDALFGS
QPVARGSLHYNSHAYATERKSFGERLTAGRATKHFLQEFSSPLSQKMAKLPRLSTDGESF
SEKKPTAAEHLKKSPVFSNSPALSPALRLSSKLLHHSNSTGSGSFRESPKPSKQDPNLWT
VEEVMQYIRDIDPVLAPHADLFRKHEIDGKALLLLRSDMIMKYMGLKLGPALKLIFHIDK
LKKA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacctgtgctacagaaagccacagagtggaaagatacccaaaagatcaagcat
gcgcggagtggacgaccctcccgagtggcctcgcagtaccaagcggagcattttagttgg
gagaagtacctaaaagagaccggggctatccctgctcccccatcatgtttcagacagagt
ctcacccccccggctaacgagttcaaagcggggatgaagctggaggctcaggacccgcgc
aacaccacatccacctgcatcgccaccgtggtagggctgacggggtcgcgactgcggctg
cgcttggacggctctgacaacaagaatgacttttggcgcctggtggattcctcggagatc
cagccaataggcagctgtgaaaagagtggaggcatgctgcagccaccgctcggttttcgt
ctaaacgcatcctcttggccaatgtttctgctgaaaaccctaaatggcgccgaaatggct
ccgcctcgcatttttcacaagcagcagcctccagctccagagcagaactccttcaaagtg
ggcatgaagctggaggccgtggaccgcaaaaacccccactacatctgcccagccacagtc
ggcgcactgcgcggtgtcgaggtgctggtcacctttgacggatggcgtggagctttcgat
tactactgtcgctacgactcccgagacatcttcccagtcggctggtgtaccctcaccgga
gacaaccttcaggcccccggcaccaaagtggtgctgcctaggaatcccgaaacacctaca
gacggaggtgtggagaactctgccatgaatcccacccccccggtgggcagacctccgggt
caaagaggacgtaagccaggtcgcaggaaggtgacggcgccctggaaccagaaggcgtct
gcactggaaccacagagcatccagccggtcaaaagcctggagcctgtcaagatctctaag
aagcgggggccgaaaccgggcagtaagatcggttgggccaaaagggccggctggttggag
gaggccatggctggtccgggacggccggtgaccggattagggcgaaccagaggaagactg
ccgactaactggatgcagaggatagctctgcagcaggcccaggaggaacccatcaggatc
ccaaagaaaagaggacccaagcctggcagtaagagaaaacccagagtggtgcctaatccc
gcccccacgtcccccaccagcagcactccagagccggacaccagcactgtgccgctggac
aacgccaccatccccaactcagctctgcaggctcccacagtttgtgtgtacctcaacaag
tatggcaaagtggggccccatctggaccagaggcgcatccagcagcttcccgaccacttc
ggtccaggccgagcctcgtcggtgctccagcagtgcgttcaggcttgcgtagactccgcc
cacaatcaagcgacggtcttttcctgtctgaagtccggacagggtggtgaggtcatatca
gccttcttcgaccagcagcagcacaccctgaccctgccgacggtcagcagcgtcacctac
gtcctccgcttcctggagaagctctgccacaaccttcactgtgatgccctctttggtagc
cagcctgtagccagaggaagtctgcactacaacagccacgcgtacgctacagagaggaag
agttttggagagcgtctgacagcaggccgagccaccaagcacttccttcaggagtttagc
agccctctgtctcagaaaatggctaaactccccagactctccactgatggcgagtctttc
tcagagaaaaaaccaacagctgcagagcacttaaagaagagtcccgttttttctaattct
ccagcgctgtcgccggccctcaggttgtcctcaaagctgctgcatcacagcaactctaca
ggatcaggtagtttcagagaaagccccaagcccagcaaacaggatccaaacctgtggact
gtagaggaagtcatgcagtacattagagatattgacccagtgctggctccacatgcggac
ctcttcagaaaacatgaaattgatggaaaagccctcctgttgctgcgcagcgacatgatc
atgaaatacatgggtttgaagcttggccccgcactcaaacttatcttccacatcgacaag
ctgaaaaaagcctga
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