Oryzias melastigma (Indian medaka): 112144089
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Entry
112144089 CDS
T07439
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112144089 (irx2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112144089 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
COG5_C
Motif
Other DBs
NCBI-GeneID:
112144089
NCBI-ProteinID:
XP_024124175
Ensembl:
ENSOMEG00000013826
LinkDB
All DBs
Position
LG16:14352217..14357288
Genome browser
AA seq
504 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTAGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDADGERKDTERSDKTLDNSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
VRKVSSDQAADKCDDGDGEEQSHRPPLSPKPVTSSPLTGVEAPVLSHLHYHHHHHLRHLH
HLHSQREDLARSLVSGSNNKLTSCLDSRPSSGPPQNAATKPKLWSLVEIATSDQKEQHQQ
PGQSGQPNCPSSSGGLSPPSTTSPAAAATSPSLYSAPSILGRPIYYTSPFYSNYTNYGNF
SPLQGQGILRYTNSSGVSLAAAAAAAAAAAAANESLSSSQQAAEAGANPKHRPDSPLVKN
NSNQIGVVEQQHFRPINLEAKKGT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccggcttatggggcctctgctctggctgctccgcgcaatgaggacttggcgcggtcttcc
tctggctcagcattcagcccttaccctggatcggctgctttctccgcctcggctggcgca
ggcttttcgagtccgctgtcgtattctactgatccaacgacgggattcccatcttacatg
tcttctccatatgacgcgcacactgctgggatggccggcgctttaagttaccatccatat
gggagtccggggtacccctatcagctcaacgaccccgcttaccgcaagaacgcgacgaga
gacgccacggccacgttgaaggcctggctgcaggagcacaggaagaacccctaccccacg
aagggggagaagatcatgctggccattatcacgaagatgaccttgacgcaggtctccacc
tggttcgccaacgccaggaggaggctcaagaaggagaacaagatgacgtgggcgccccgg
aataagagcgaggacgaggatgaggaggacgcggacggggagaggaaggacacggagcgc
tccgacaagacgctggataacagcgaggcgtcggcggaggacgaaggcatcagtttgcac
gtggacacgctcacggaccactcgtgctcggcggagtccgacggggagaaggtcagctgc
gtgcgtaaagtcagctccgaccaggcggccgacaaatgtgacgacggcgacggtgaggag
cagagccaccggccccctctgtcccccaagcccgtcacctcgtcgcccctgacgggcgtg
gaagccccggttctcagccatctccactatcaccaccaccaccacctccggcacctccac
cacctccacagccagcgcgaggatttggcccggagcctcgtcagtggcagtaataacaaa
ctgacttcgtgtcttgacagcaggccctcatccgggcccccccagaacgctgcaaccaaa
cccaaattgtggtctttggtggagattgctacctcggaccaaaaggagcaacatcagcaa
ccgggacagtcggggcaaccaaattgcccctcctccagcgggggactcagtccaccgtcc
accacctcccctgctgctgctgccacctccccctccctctactctgccccctccatcctt
ggaagacctatttattacacgtctcccttttatagcaattacacaaactatggcaacttc
agccccctgcagggtcagggcatcctgcgctacaccaactcctccggagtgagcctcgcc
gctgccgccgccgcggccgccgcagccgccgccgcaaacgagagcctgagctcctctcag
caggctgcggaggccggcgcgaaccccaagcacaggccagactcccccctcgtcaaaaat
aactcaaaccagattggggttgtcgagcaacaacattttagacccattaatttagaagca
aagaaaggtacgtaa
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