Oryzias melastigma (Indian medaka): 112144205
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Entry
112144205 CDS
T07439
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04382
Cornified envelope formation
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112144205 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112144205 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112144205 (lamc2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
DUF1664
Motif
Other DBs
NCBI-GeneID:
112144205
NCBI-ProteinID:
XP_024124337
Ensembl:
ENSOMEG00000002467
LinkDB
All DBs
Position
LG17:12961274..12976342
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AA seq
1050 aa
AA seq
DB search
MKRRGGLVLLCALAAALCVAHAHGHSRHHSQYCQWDGWGLRCKQCKDGFYLQRPGLICTP
CNCHPTGAISATCDSRGRCSCKDGVSGEKCDRCSNGIMGPNGCSPRRQPREDSGNLPCFC
YGHSSRCFSQSGFSVHNISSTFTSGSEGWRVTTAKGDTPRDVLFRWSPKYQDLEVISKES
LPIYLSAPDSYLGNQLLSYTQNFSFGLRLDRGVRRPSAADVILEGAGLRVSASLGDLSSI
VPCGQKIGYSFRLDQQPGSGWRPPLSPFEFQKLLQNLTAIRIRTTFGEAGRGYLDNVNLV
SARRGSGVPAQWVQTCICPPGHEGDSCERCSAGFRRSIPADGAFSPCKPGDPENPDRFSA
DETPTVQRCQSGFYKEPRQGGACVRCPCAEGESCSLPPGFVEPRCDRCPTGTSGPGCDTC
LEGFYGDPAGSTGQLRPCKPCNCDAQGSESVQCDTFGRCRCKPGFEGPTCRRASCPACFS
PVQRKVEENAAKVKELERLLPDQDSGPRPGDSSKMEAALKVTEELLNYLQETTEELKEIE
KGLQGRLSSVRRTQLTERQDIQDIAREVDSIVKQRQTYETKVKEVQALLEVMEQKMEEGK
AKIRSVEVPVSDAPLSPNNLTSLVPKASSLADQHQKKANAVERTANEALSDSEKSLALLR
TLTNRENKVKELIGDLKALNEQNLSEVKILEKEASRLSDEATEESKMADDMLKDIAIMEG
KIPGSGTEQIDAMAARLDETKEAVNKNISDLEDLQTVVQQEQAAARDLLDEGRAGLQEFN
RLLDRVNGAKAVTEEALKRITINNNKLDDALSGLRDFEQQVDGSKTLADDAISRLPGING
TIQRAAGNNARTQSVLANVSADHSEALAAINALKDQLSGLKEGVGNLPDHSGLEGGAATL
NTEAKDLKTEAEQTARDLEEDLNEARALKDDAEEAAVGAAAASDGAKRGREAVARTLQDI
NKLLADMEHSAVDEDQLKQLEDSLSRVQEEVHGRLTSRLQDMWEQEGAQRRHLSRISLDL
DRLLVDVTNLEDILNAVPSGCYNTDPIEEA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgcggcggtctggttcttctctgcgctctagcagccgcgctctgcgtggcg
cacgcgcacggacactcccggcaccactcccagtactgtcagtgggatgggtgggggctg
cgctgcaaacaatgcaaagacggcttctacctgcagaggccaggattgatctgcactccc
tgcaattgtcaccccacaggggccatcagcgccacctgtgacagcagggggcggtgcagc
tgtaaagatggcgtcagtggagaaaaatgcgaccgctgctccaatggaataatgggtcca
aatggatgttcaccaagacgtcagcccagagaggattctgggaatttaccatgtttctgc
tatggacacagtagtcggtgtttttcacaatctggcttctccgtccacaacatcagctcc
accttcacctctggttctgagggttggagggtgaccacagcaaaaggtgacaccccccgt
gacgttctcttccgctggtcacccaaataccaggacttagaggtgatatccaaagaaagt
ctgcccatttacttgagcgcgcctgactcttacctgggaaaccagctgctgagctacact
cagaacttctcctttgggttgcgactggaccgtggagtacgtcgcccatcagctgctgac
gtgattctggagggagctggtttgagggtgtcggcctctctgggggacctgagctccatt
gtgccttgtggtcagaagattggctatagcttcaggctggaccagcagccgggcagcgga
tggaggcctccactgtccccctttgagttccagaagcttctccagaacctcacagccatc
aggatccggaccacgtttggagaagccggacgtggttacctggacaatgtcaatctagtg
tcagctcggcgtggaagtggtgtcccggcccagtgggtgcagacctgtatctgtcctccg
ggacacgagggcgactcgtgtgagcgctgctcagccgggttcaggcgcagcatccctgcg
gatggagcattcagtccctgcaagcctggagacccagagaacccagaccgtttctctgca
gatgagacacccactgttcagcgctgccagtcagggttttacaaagagccaaggcagggg
ggcgcatgtgtgcggtgtccctgcgcagagggagagtcctgctcactgcctcctggattt
gttgaacctcgctgtgaccgctgcccaacaggaaccagcggtcctggatgtgacacctgt
ctggaaggattttatggtgacccggccggttccacaggccaactgcgaccctgcaaaccc
tgtaactgtgacgctcaaggatccgaatcggtacagtgtgacacatttggccgctgtcgc
tgtaagccgggctttgagggtccaacatgccgcagggctagttgtcccgcctgtttcagc
cctgtccaaagaaaagtggaggagaacgccgccaaagtaaaagagctggagaggctgtta
ccagaccaggactctggtccaaggccaggtgactcctccaagatggaggccgcactaaag
gtcacagaggagctgctgaattatctgcaggagaccacagaggagctgaaagaaatagag
aaaggactgcagggtcgactgtcgtctgtcagacggactcagctgaccgagcggcaggac
atccaggacatcgctcgtgaggtcgacagcatcgtaaaacaacgacagacttacgagaca
aaggtgaaggaggtgcaggccctgctggaggtgatggaacagaagatggaggagggaaag
gccaaaatccgatcagtcgaggttccagttagcgatgctccactaagtccaaacaacctg
acttccctggtgccgaaagcctccagcctggctgaccaacaccagaaaaaggcaaacgct
gtggagcgaacagccaatgaggcgctaagcgactcggagaagagtctggctctgctgagg
actctgactaaccgagagaacaaagtcaaggagctgatcggggatctgaaagcactgaac
gagcagaatttgtctgaggtcaagattctggagaaggaggcgagccgcctcagcgacgaa
gccacagaggagagcaaaatggccgacgacatgttgaaggacatcgccatcatggaaggg
aagatcccgggatcaggaacggagcagatcgacgccatggctgccaggctggacgagaca
aaggaggctgtgaataagaacatctcagacctggaggatcttcagactgtggtccaacaa
gaacaggctgcagccagagacctgctggatgaaggcagagctggcctccaggagttcaac
agactgctggacagagtcaatggtgccaaggctgtgacggaggaggctcttaaacgcatc
accattaacaacaataagcttgacgacgccctcagtggcctgagagactttgagcagcag
gtggatggcagcaagactctggctgatgatgccatcagccgtctcccaggaataaacggc
accatccagagggcagctggaaacaacgccaggacccagtctgtgctggcaaacgtgtct
gcagaccacagtgaagctctagcagccattaacgcgctgaaggaccagctcagcgggctg
aaggagggcgttggaaatctgccggatcactccgggttggaggggggagccgccacactc
aacactgaggcaaaagacctgaagacggaggcagagcagacagctagagacctggaggag
gatctgaatgaggccagagcgttaaaggatgacgctgaggaggcggctgtgggagcggct
gcagcttcagacggagccaagcgtggcagagaggcggtggctcgaaccctgcaggacatc
aacaagctgctggctgacatggagcactctgctgtggatgaagatcagctgaagcagctg
gaggactccctgtccagagttcaggaggaggtgcacggccgtctcacgtcccggctgcag
gacatgtgggagcaagagggcgctcagcgccgccacctgtcgaggatcagcctggacttg
gaccggctcctggttgacgtgactaacctggaggacatcctgaatgcggttcccagtgga
tgctacaacaccgaccccatcgaggaggcctga
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integrated database retrieval system