KEGG   Oryzias melastigma (Indian medaka): 112144205
Entry
112144205         CDS       T07439                                 
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
  KO
K06246  laminin, gamma 2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04382  Cornified envelope formation
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112144205 (lamc2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112144205 (lamc2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    112144205 (lamc2)
SSDB
Motif
Pfam: Laminin_B EGF_laminin EGF_LMN_ATRN DUF1664
Other DBs
NCBI-GeneID: 112144205
NCBI-ProteinID: XP_024124337
Ensembl: ENSOMEG00000002467
LinkDB
Position
LG17:12961274..12976342
AA seq 1050 aa
MKRRGGLVLLCALAAALCVAHAHGHSRHHSQYCQWDGWGLRCKQCKDGFYLQRPGLICTP
CNCHPTGAISATCDSRGRCSCKDGVSGEKCDRCSNGIMGPNGCSPRRQPREDSGNLPCFC
YGHSSRCFSQSGFSVHNISSTFTSGSEGWRVTTAKGDTPRDVLFRWSPKYQDLEVISKES
LPIYLSAPDSYLGNQLLSYTQNFSFGLRLDRGVRRPSAADVILEGAGLRVSASLGDLSSI
VPCGQKIGYSFRLDQQPGSGWRPPLSPFEFQKLLQNLTAIRIRTTFGEAGRGYLDNVNLV
SARRGSGVPAQWVQTCICPPGHEGDSCERCSAGFRRSIPADGAFSPCKPGDPENPDRFSA
DETPTVQRCQSGFYKEPRQGGACVRCPCAEGESCSLPPGFVEPRCDRCPTGTSGPGCDTC
LEGFYGDPAGSTGQLRPCKPCNCDAQGSESVQCDTFGRCRCKPGFEGPTCRRASCPACFS
PVQRKVEENAAKVKELERLLPDQDSGPRPGDSSKMEAALKVTEELLNYLQETTEELKEIE
KGLQGRLSSVRRTQLTERQDIQDIAREVDSIVKQRQTYETKVKEVQALLEVMEQKMEEGK
AKIRSVEVPVSDAPLSPNNLTSLVPKASSLADQHQKKANAVERTANEALSDSEKSLALLR
TLTNRENKVKELIGDLKALNEQNLSEVKILEKEASRLSDEATEESKMADDMLKDIAIMEG
KIPGSGTEQIDAMAARLDETKEAVNKNISDLEDLQTVVQQEQAAARDLLDEGRAGLQEFN
RLLDRVNGAKAVTEEALKRITINNNKLDDALSGLRDFEQQVDGSKTLADDAISRLPGING
TIQRAAGNNARTQSVLANVSADHSEALAAINALKDQLSGLKEGVGNLPDHSGLEGGAATL
NTEAKDLKTEAEQTARDLEEDLNEARALKDDAEEAAVGAAAASDGAKRGREAVARTLQDI
NKLLADMEHSAVDEDQLKQLEDSLSRVQEEVHGRLTSRLQDMWEQEGAQRRHLSRISLDL
DRLLVDVTNLEDILNAVPSGCYNTDPIEEA
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgaagaggcgcggcggtctggttcttctctgcgctctagcagccgcgctctgcgtggcg
cacgcgcacggacactcccggcaccactcccagtactgtcagtgggatgggtgggggctg
cgctgcaaacaatgcaaagacggcttctacctgcagaggccaggattgatctgcactccc
tgcaattgtcaccccacaggggccatcagcgccacctgtgacagcagggggcggtgcagc
tgtaaagatggcgtcagtggagaaaaatgcgaccgctgctccaatggaataatgggtcca
aatggatgttcaccaagacgtcagcccagagaggattctgggaatttaccatgtttctgc
tatggacacagtagtcggtgtttttcacaatctggcttctccgtccacaacatcagctcc
accttcacctctggttctgagggttggagggtgaccacagcaaaaggtgacaccccccgt
gacgttctcttccgctggtcacccaaataccaggacttagaggtgatatccaaagaaagt
ctgcccatttacttgagcgcgcctgactcttacctgggaaaccagctgctgagctacact
cagaacttctcctttgggttgcgactggaccgtggagtacgtcgcccatcagctgctgac
gtgattctggagggagctggtttgagggtgtcggcctctctgggggacctgagctccatt
gtgccttgtggtcagaagattggctatagcttcaggctggaccagcagccgggcagcgga
tggaggcctccactgtccccctttgagttccagaagcttctccagaacctcacagccatc
aggatccggaccacgtttggagaagccggacgtggttacctggacaatgtcaatctagtg
tcagctcggcgtggaagtggtgtcccggcccagtgggtgcagacctgtatctgtcctccg
ggacacgagggcgactcgtgtgagcgctgctcagccgggttcaggcgcagcatccctgcg
gatggagcattcagtccctgcaagcctggagacccagagaacccagaccgtttctctgca
gatgagacacccactgttcagcgctgccagtcagggttttacaaagagccaaggcagggg
ggcgcatgtgtgcggtgtccctgcgcagagggagagtcctgctcactgcctcctggattt
gttgaacctcgctgtgaccgctgcccaacaggaaccagcggtcctggatgtgacacctgt
ctggaaggattttatggtgacccggccggttccacaggccaactgcgaccctgcaaaccc
tgtaactgtgacgctcaaggatccgaatcggtacagtgtgacacatttggccgctgtcgc
tgtaagccgggctttgagggtccaacatgccgcagggctagttgtcccgcctgtttcagc
cctgtccaaagaaaagtggaggagaacgccgccaaagtaaaagagctggagaggctgtta
ccagaccaggactctggtccaaggccaggtgactcctccaagatggaggccgcactaaag
gtcacagaggagctgctgaattatctgcaggagaccacagaggagctgaaagaaatagag
aaaggactgcagggtcgactgtcgtctgtcagacggactcagctgaccgagcggcaggac
atccaggacatcgctcgtgaggtcgacagcatcgtaaaacaacgacagacttacgagaca
aaggtgaaggaggtgcaggccctgctggaggtgatggaacagaagatggaggagggaaag
gccaaaatccgatcagtcgaggttccagttagcgatgctccactaagtccaaacaacctg
acttccctggtgccgaaagcctccagcctggctgaccaacaccagaaaaaggcaaacgct
gtggagcgaacagccaatgaggcgctaagcgactcggagaagagtctggctctgctgagg
actctgactaaccgagagaacaaagtcaaggagctgatcggggatctgaaagcactgaac
gagcagaatttgtctgaggtcaagattctggagaaggaggcgagccgcctcagcgacgaa
gccacagaggagagcaaaatggccgacgacatgttgaaggacatcgccatcatggaaggg
aagatcccgggatcaggaacggagcagatcgacgccatggctgccaggctggacgagaca
aaggaggctgtgaataagaacatctcagacctggaggatcttcagactgtggtccaacaa
gaacaggctgcagccagagacctgctggatgaaggcagagctggcctccaggagttcaac
agactgctggacagagtcaatggtgccaaggctgtgacggaggaggctcttaaacgcatc
accattaacaacaataagcttgacgacgccctcagtggcctgagagactttgagcagcag
gtggatggcagcaagactctggctgatgatgccatcagccgtctcccaggaataaacggc
accatccagagggcagctggaaacaacgccaggacccagtctgtgctggcaaacgtgtct
gcagaccacagtgaagctctagcagccattaacgcgctgaaggaccagctcagcgggctg
aaggagggcgttggaaatctgccggatcactccgggttggaggggggagccgccacactc
aacactgaggcaaaagacctgaagacggaggcagagcagacagctagagacctggaggag
gatctgaatgaggccagagcgttaaaggatgacgctgaggaggcggctgtgggagcggct
gcagcttcagacggagccaagcgtggcagagaggcggtggctcgaaccctgcaggacatc
aacaagctgctggctgacatggagcactctgctgtggatgaagatcagctgaagcagctg
gaggactccctgtccagagttcaggaggaggtgcacggccgtctcacgtcccggctgcag
gacatgtgggagcaagagggcgctcagcgccgccacctgtcgaggatcagcctggacttg
gaccggctcctggttgacgtgactaacctggaggacatcctgaatgcggttcccagtgga
tgctacaacaccgaccccatcgaggaggcctga

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