Oryzias melastigma (Indian medaka): 112144235
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Entry
112144235 CDS
T07439
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112144235 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112144235 (rpap2)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112144235 (rpap2)
Protein phosphatases and associated proteins [BR:
oml01009
]
HAD phosphatases
Fcp/Scp phosphatases
112144235 (rpap2)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112144235 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
COMM_HN
Motif
Other DBs
NCBI-GeneID:
112144235
NCBI-ProteinID:
XP_024124397
Ensembl:
ENSOMEG00000016671
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All DBs
Position
LG17:complement(17060656..17073934)
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AA seq
552 aa
AA seq
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MATVGRMKSPGKTSRKAGRRSKTLTAEEEARRKEELREQLKEKMELERRALEVVEQLLES
SVEQDFLLDSATFITPANYRDAVEERSISKLCGYPVCPNQLGKIPSQQFKICTKTNRVYD
ITERKCFCSNFCYKASKEFELQIPKTPLWLRQLESPPEIRLLKEGHSGSAGEEVLLSQKR
LKEEDVEKPPAAEPDAPCRDHGSAGEDSSDGEQDFVSSVGLQQQKPRVHWADLPQRGDGS
KNWSQGGGGNNETERPSHLLQKDSGETPQTLGPITGQAEQLDSPDRPPVEEVTAQRRDTA
PGLPITQVGVSRRGAAGLRALLGGQSAHLLETLRRTLQAWCTDHTIKFLHGATCSLASSR
DKEGEEELDEDDDEDEVVLTDDLGDGRQRGSEPDYEALLRLTQQMELREFYKGTGDLPVE
PRGNQQNLKEAVLPLIDSHAQHLIQKRITVEKLSSCLRSMVGPLHLTMSDISTDLNDLVR
TFRFTSTNIVHRVPEWTLIAVVLLHVLSAVSPVVREALQVSTSVDYVKTLLQELGLEEQH
LLSLVELFNPPL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtggggaggatgaagagtcccgggaaaacgtccagaaaagcagggagacgc
tccaaaacactaaccgctgaagaagaagccaggaggaaagaggagctgagggagcagctg
aaggagaagatggagctggagaggagagccctggaggtggtggagcagctcctggagagc
agcgtggaacaagacttcctgctggattcagccacgttcatcactccagctaattacaga
gatgctgtggaggagaggtcgatctcaaagctgtgtggttatccagtatgtccaaaccag
ctgggcaaaatcccatctcagcagttcaaaatttgtacaaagaccaacagagtttatgac
atcacagagcgcaagtgtttttgcagtaatttctgctacaaggcctccaaagagtttgag
ctgcagataccaaagacgcctctgtggctcaggcagttggagagtcccccggagatcagg
ttgctgaaggaaggacacagtgggagcgccggagaggaggtgctgctctcacagaagcgg
ctcaaagaggaagacgtcgagaaaccaccagctgcagaacctgacgccccctgcagggat
cacggctctgcaggagaggacagcagcgatggggaacaggactttgtctccagtgtgggc
ctgcagcagcagaagccccgggtgcactgggccgatctaccacaacgaggggatggaagc
aaaaactggagccaaggagggggaggtaacaatgagactgaacgtcccagtcacctccta
cagaaggacagtggagaaactccacagacactcggtcccatcacaggccaggctgagcag
cttgactcaccagaccgccctccagtggaagaggtaaccgctcagaggagagatacagca
ccaggactccccatcacccaggtgggggtgagcaggagaggagctgcagggctgcgagcg
ctgctgggggggcagagcgctcacctcctggagactctgaggaggactctgcaggcctgg
tgcaccgatcacaccatcaagttcctgcacggagccacgtgttcgctcgcctcctctcgt
gacaaagaaggagaggaggagttggatgaagatgatgatgaagatgaagtggtattgact
gatgatcttggggacgggaggcagcgggggtcagaaccagactatgaggcgctgctgagg
ctcacccagcagatggagctgagagagttctacaaagggacgggggatcttcctgtggag
cccagaggaaaccagcagaacctgaaggaggcggttctgccgctcatcgactcccacgct
cagcatctgatccagaaacgcatcacagtggagaagctcagcagctgcctcaggagcatg
gtgggcccgctgcacctcaccatgagtgacatctccacagacttgaacgacctggtgagg
acattcaggttcaccagcaccaacatcgttcacagagtcccggagtggaccctgatagca
gtggtgctgctgcacgtcctgtcggcggtgtctccggtggtgagggaagccctgcaggtt
tccacctcagtggactacgtgaagactctgctgcaggagctgggcctggaggagcagcac
ctcctgagtctggtggagctgtttaacccccccctctag
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