Oryzias melastigma (Indian medaka): 112144267
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Entry
112144267 CDS
T07439
Symbol
amph
Name
(RefSeq) amphiphysin isoform X1
KO
K12562
amphiphysin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112144267 (amph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112144267 (amph)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112144267 (amph)
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
112144267 (amph)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112144267 (amph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
HD_3
ORC3_ins
THP2
BAR_3
FliS
CRA
Motif
Other DBs
NCBI-GeneID:
112144267
NCBI-ProteinID:
XP_024124488
Ensembl:
ENSOMEG00000002995
LinkDB
All DBs
Position
LG17:complement(12662861..12681971)
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AA seq
727 aa
AA seq
DB search
MAEIKTGIFAKNVQKRLNRAQEKVLQKLGKADETKDEQFEQVVSNFKRQESEGSRLQREM
KAYMSAIKGMQQASINLTQSLHEVYEPDWHGKDEVLTIGKDCDALWEDFHNKLVDSTLLN
LDEYLLQFPDLKTRVAKRSRKLIDYDSARHHLETLQTSGLKNDRKITKAEEELRKAQRVF
DELNVGLQDELPTLWDRRVGFYISTFKSVTSLEAKFHREISLVCRELYEVMTQLREQHSD
KIFTIQGAPSDSGPLRLARTPSPPEDESPPESPDMSYNNRLRPVSPGPPRPKSPVQLKKG
PPVPPPPKVTPTKELAEEQIIDLFGGDFLPAPSPSQPNERPGESLLDLDFDAFQPDESVS
PIPQTAVPWDMWSGNSQPAQPVADTGFVAEWTADFGSMSANGEAASSADAFTTGLQEGQG
GAQEGTLVGDGDTKTSPQDKELVDEVASSFNGFTQDAGDPSFFADFDNINDVNSNSSKDP
EASGTETVGSAEATDEQDKCETPPAGAEEPKSPPLPYDEKPPSPQGEEEVVEPQPSPTDE
VEEPKASLSDQDEQGKHSEEEKPTASFGAADSEQVEPFTVPPAEETKTTSDEAATSEQMP
IPSVVIEPASSNEGDDDRDADIISPTTISDNGVAIPTQPIKHMSPSGSASGLPDDFLYKV
ETMHDFEAANSDELDLKRGDIVLVIPTASVEDQDAGWLTGFKENDWLTLGVGAQKGLFPE
NFTQRLE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatcaaaacgggaatctttgctaaaaacgtgcagaagcggctgaaccgcgcg
caggagaaggttttgcagaaactgggaaaagcagatgaaaccaaagatgagcagtttgaa
caagtggtttccaacttcaagagacaggagtctgaaggctcacggctgcagcgggaaatg
aaggcctacatgtctgcgatcaaagggatgcagcaggcctctatcaacctgacccagtct
ctgcatgaagtctacgagccggactggcatggaaaagacgaggtcctgacgattggaaag
gactgtgatgccttgtgggaagacttccacaacaaactggtggactctaccctcttgaac
ctggatgagtacctgctgcagttcccagacctcaagacccgcgtggccaaaaggagccgg
aaactgatcgactacgacagcgcacgccaccatttggaaactctgcaaacatcggggtta
aagaatgaccgcaaaatcacaaaggcggaagaagagttgagaaaggctcagagagtgttt
gatgagctgaacgttggtctgcaggatgaactgccaactttgtgggaccgccgggttggc
ttctacattagcacctttaagagtgtgacgagtctggaggcaaagtttcatcgtgaaatc
tcattggtctgcagagagttgtatgaggtgatgacccagctgcgtgagcagcactctgac
aaaatcttcaccattcaaggagccccaagtgattcaggacctttgcgtctggcgaggacc
ccatcaccgccagaggatgagagccccccggagagccctgacatgagctacaacaacagg
ctccgccctgtctcacctggtccaccacgacccaaatctcctgtacagctgaaaaagggg
ccaccagtgcctcctccaccaaaggtcacacctacaaaggagctagctgaggagcagatc
attgacctgtttggtggggacttcctaccagcaccttcaccctcacagcccaacgagcga
ccaggggagtccctgcttgatttagactttgatgcttttcaaccggatgaaagtgtttca
ccaatacctcagacagccgtgccgtgggacatgtggtcgggaaactcccagcccgcacag
cctgttgctgataccggttttgtggctgaatggactgctgattttggttcaatgtcagca
aacggagaagctgcttcctcggctgacgctttcaccacggggctgcaagagggccagggc
ggagctcaggaagggactctggttggagatggagacacaaagacatctcctcaggacaaa
gagctggtggacgaggttgccagttcttttaatggatttacacaggacgcaggtgacccg
tcattcttcgcagattttgataacataaatgatgttaacagcaattcatccaaagaccct
gaagcatctggaacagaaaccgttggctcagcagaggctactgatgaacaggataaatgt
gaaactcccccagctggggcagaggagcccaaaagtccacctcttccctatgatgagaaa
cctccaagtcctcagggggaggaagaggtggtggaacctcaaccaagtcctactgatgaa
gtggaagaaccaaaagcttccctctcagatcaagatgaacaaggaaaacattcagaggag
gaaaaaccgactgcttcatttggagctgcagactctgagcaggtggagcccttcacagtt
cctccagctgaagagaccaaaactacttcagatgaagctgctacatcggaacagatgccg
atcccctctgtggtaattgaaccggcctccagcaatgaaggcgatgatgatcgtgatgcc
gacatcatctctcccaccaccatcagtgacaatggcgtggcaattccaactcaacctatc
aaacacatgagcccctcaggctcagcgtcaggacttcctgatgactttttgtacaaggtg
gagactatgcatgactttgaggctgcaaactctgatgaactggatctaaagagaggggat
attgttttggtgattcccacagcttcagtggaagatcaggatgcaggatggctcacgggg
ttcaaagaaaacgactggctaacacttggtgttggtgctcaaaaaggacttttcccagaa
aactttacccagcgtttggagtga
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